STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAGlgA; COG family: predicted glycosyltransferases; PFAM_ID: Glycos_transf_1. (416 aa)    
Predicted Functional Partners:
glgE
Possible glycanase or glycogenase with amylase domain; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
 0.979
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.955
glgP
Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.948
pgm
Phosphoglucomutase; Glucose phosphomutase; Pgm; COG family: phosphoglucomutase; PFAM_ID: PGM_PMM_I; PFAM_ID: PGM_PMM_II; PFAM_ID: PGM_PMM_III; PFAM_ID: PGM_PMM.
   
 0.933
spl
Sucrose glucosyltransferase; Spl; COG family: glycosidases; PFAM_ID: alpha-amylase.
  
 0.912
ugpA
Probable UTP-glucose-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UdpGP; UGPase; UgpA.
   
 
 0.908
malQ
4-alpha-glucanotransferase; Amylomaltase; MalQ; COG family: 4-alpha-glucanotransferase; PFAM_ID: 4A_glucanotrans.
     
 0.905
malQ1
4-alpha-glucanotransferase; Amylomaltase; MalQ1; COG family: 4-alpha-glucanotransferase; PFAM_ID: 4A_glucanotrans.
     
 0.905
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.759
BL0228
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
  
 0.676
Your Current Organism:
Bifidobacterium longum
NCBI taxonomy Id: 206672
Other names: B. longum NCC2705, Bifidobacterium longum NCC2705, Bifidobacterium longum str. NCC2705
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