STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pppProbable phosphoprotein phosphatase; Ppp; COG family: protein serine/threonine phosphatases; PFAM_ID: PP2C. (310 aa)    
Predicted Functional Partners:
pknB
PknB; COG family: serine/threonine protein kinases; PFAM_ID: pkinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
 
 
 0.964
pknA2
PknA2; COG family: serine/threonine protein kinases; PFAM_ID: pkinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
 
 
 0.964
BL1198
Probable serine/threonine-protein kinase; COG family: serine/threonine protein kinases; PFAM_ID: pkinase.
 
 
 0.936
pknA
PknA; COG family: serine/threonine protein kinases; PFAM_ID: pkinase.
 
 
 0.876
BL1200
Narrowly conserved hypothetical protein with duf54; COG family: uncharacterized Acr; PFAM_ID: DUF58.
 
    0.876
BL0660
Widely conserved protein with eukaryotic protein kinase domain; COG family: serine/threonine protein kinases; PFAM_ID: pkinase.
 
 
 0.872
BL0918
Hypothetical protein with probable serine/threonine-protein kinase domain; COG family: serine/threonine protein kinases; PFAM_ID: pkinase.
 
 
 0.866
BL1201
Hypothetical protein with transglutaminase domain; COG family: transglutaminase-like enzymes, putative cysteine proteases; PFAM_ID: Transglut_core.
       0.852
moxR
Methanol dehydrogenase regulatory protein homolog; MoxR; COG family: MoxR-like ATPases; PFAM_ID: Mg_chelatase.
 
  
 0.831
BL1199
Large protein with C-terminal fibronectin type III domain.
       0.763
Your Current Organism:
Bifidobacterium longum
NCBI taxonomy Id: 206672
Other names: B. longum NCC2705, Bifidobacterium longum NCC2705, Bifidobacterium longum str. NCC2705
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.