STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CJF30_00006862Gaba permease protein. (531 aa)    
Predicted Functional Partners:
CJF30_00003661
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
    
 
 0.508
CJF30_00009439
2OG-Fe(II)oxygenase superfamily protein.
    
  0.405
CJF30_00007245
Acid alpha-amylase protein.
    
  0.405
CJF30_00007244
Aamy domain-containing protein.
    
  0.405
CJF30_00005313
Alpha amylase protein.
    
  0.405
CJF30_00002758
Aamy domain-containing protein.
    
  0.405
CJF30_00003182
Acid alpha-amylase protein.
    
  0.405
CJF30_00010377
Acid alpha-amylase protein.
    
  0.405
CJF30_00010376
Alpha-13-glucan synthase protein.
    
  0.405
CJF30_00007467
Isochorismatase protein.
    
  0.405
Your Current Organism:
Rutstroemia sp. NJR2017a BBW
NCBI taxonomy Id: 2070414
Other names: R. sp. NJR-2017a BBW, Rutstroemia sp. NJR-2017a BBW, Rutstroemia sp. NJR-2017a_BBW
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.