STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ONH81225.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (71 aa)    
Predicted Functional Partners:
ONH83756.1
SMC-Scp complex subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.923
ONH81226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
ONH81231.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
       0.743
smc
Hypothetical protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 
 0.641
motB_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.591
vapC-2
VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
       0.489
ONH81228.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.486
cmk
Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.443
Your Current Organism:
Roseomonas mucosa
NCBI taxonomy Id: 207340
Other names: ATCC BAA-692, ATCC:BAA:692, CCUG 48654, LMG 22453, LMG:22453, NCTC 13291, R. mucosa, Roseomonas mucosa Han et al. 2003 emend. Sanchez-Porro et al. 2009, Roseomonas sp. MDA5527, strain MDA5527
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