Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY43926.1 | OSY43927.1 | BG845_00046 | BG845_00047 | Putative hydrolase/MSMEI_3903. | Hypothetical protein. | 0.822 |
OSY43926.1 | proP_1 | BG845_00046 | BG845_00045 | Putative hydrolase/MSMEI_3903. | Proline/betaine transporter. | 0.482 |
OSY43927.1 | OSY43926.1 | BG845_00047 | BG845_00046 | Hypothetical protein. | Putative hydrolase/MSMEI_3903. | 0.822 |
OSY43927.1 | proP_1 | BG845_00047 | BG845_00045 | Hypothetical protein. | Proline/betaine transporter. | 0.445 |
OSY43933.1 | lcfB_16 | BG845_00053 | BG845_04165 | Carboxymuconolactone decarboxylase family protein. | Long-chain-fatty-acid--CoA ligase. | 0.694 |
OSY43933.1 | proP_1 | BG845_00053 | BG845_00045 | Carboxymuconolactone decarboxylase family protein. | Proline/betaine transporter. | 0.433 |
kgtP_2 | proP_1 | BG845_05809 | BG845_00045 | Alpha-ketoglutarate permease. | Proline/betaine transporter. | 0.762 |
lcfB_16 | OSY43933.1 | BG845_04165 | BG845_00053 | Long-chain-fatty-acid--CoA ligase. | Carboxymuconolactone decarboxylase family protein. | 0.694 |
lcfB_16 | proP_1 | BG845_04165 | BG845_00045 | Long-chain-fatty-acid--CoA ligase. | Proline/betaine transporter. | 0.450 |
proP_1 | OSY43926.1 | BG845_00045 | BG845_00046 | Proline/betaine transporter. | Putative hydrolase/MSMEI_3903. | 0.482 |
proP_1 | OSY43927.1 | BG845_00045 | BG845_00047 | Proline/betaine transporter. | Hypothetical protein. | 0.445 |
proP_1 | OSY43933.1 | BG845_00045 | BG845_00053 | Proline/betaine transporter. | Carboxymuconolactone decarboxylase family protein. | 0.433 |
proP_1 | kgtP_2 | BG845_00045 | BG845_05809 | Proline/betaine transporter. | Alpha-ketoglutarate permease. | 0.762 |
proP_1 | lcfB_16 | BG845_00045 | BG845_04165 | Proline/betaine transporter. | Long-chain-fatty-acid--CoA ligase. | 0.450 |