STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY43947.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
OSY35553.1
SnoaL-like polyketide cyclase.
  
     0.715
OSY43131.1
Hypothetical protein.
  
     0.591
hapE_3
4-hydroxyacetophenone monooxygenase.
 
     0.485
OSY43948.1
Hypothetical protein.
       0.475
npcC
Hydroxyquinol 1,2-dioxygenase.
  
     0.471
pcpB_2
Pentachlorophenol 4-monooxygenase.
  
     0.470
pgdA
Peptidoglycan deacetylase.
  
     0.461
caeA_1
Carboxylesterase A precursor.
  
     0.454
OSY38252.1
SMI1 / KNR4 family protein.
  
     0.454
MetE_1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
     0.421
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.