STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acrC_1Acryloyl-CoA reductase (NADH). (385 aa)    
Predicted Functional Partners:
echA8_1
Putative enoyl-CoA hydratase echA8.
 
 0.947
mmsB_1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
  
 0.939
echA8_2
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.909
mmsA
Methylmalonate-semialdehyde dehydrogenase [acylating].
 
  
 0.854
etfA
Electron transfer flavoprotein subunit alpha.
 
 0.727
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.717
acrC_4
Acryloyl-CoA reductase (NADH).
  
     0.716
fadB2_1
3-hydroxybutyryl-CoA dehydrogenase.
 
 
 0.678
mmsB_4
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
 
  
 0.667
acdA_3
Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name.
  
     0.651
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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