Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
acdA_3 | acrC_1 | BG845_01058 | BG845_00183 | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | Acryloyl-CoA reductase (NADH). | 0.651 |
acdA_3 | acrC_4 | BG845_01058 | BG845_04182 | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | Acryloyl-CoA reductase (NADH). | 0.690 |
acdA_3 | echA8_1 | BG845_01058 | BG845_00184 | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | Putative enoyl-CoA hydratase echA8. | 0.527 |
acdA_3 | echA8_2 | BG845_01058 | BG845_00186 | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.527 |
acdA_3 | etfA | BG845_01058 | BG845_00523 | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | Electron transfer flavoprotein subunit alpha. | 0.659 |
acdA_3 | fadB2_1 | BG845_01058 | BG845_00179 | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.430 |
acdA_3 | fadJ | BG845_01058 | BG845_04317 | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | Fatty acid oxidation complex subunit alpha. | 0.717 |
acrC_1 | acdA_3 | BG845_00183 | BG845_01058 | Acryloyl-CoA reductase (NADH). | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | 0.651 |
acrC_1 | acrC_4 | BG845_00183 | BG845_04182 | Acryloyl-CoA reductase (NADH). | Acryloyl-CoA reductase (NADH). | 0.716 |
acrC_1 | echA8_1 | BG845_00183 | BG845_00184 | Acryloyl-CoA reductase (NADH). | Putative enoyl-CoA hydratase echA8. | 0.947 |
acrC_1 | echA8_2 | BG845_00183 | BG845_00186 | Acryloyl-CoA reductase (NADH). | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.909 |
acrC_1 | etfA | BG845_00183 | BG845_00523 | Acryloyl-CoA reductase (NADH). | Electron transfer flavoprotein subunit alpha. | 0.727 |
acrC_1 | fadB2_1 | BG845_00183 | BG845_00179 | Acryloyl-CoA reductase (NADH). | 3-hydroxybutyryl-CoA dehydrogenase. | 0.678 |
acrC_1 | fadJ | BG845_00183 | BG845_04317 | Acryloyl-CoA reductase (NADH). | Fatty acid oxidation complex subunit alpha. | 0.717 |
acrC_1 | mmsA | BG845_00183 | BG845_00182 | Acryloyl-CoA reductase (NADH). | Methylmalonate-semialdehyde dehydrogenase [acylating]. | 0.854 |
acrC_1 | mmsB_1 | BG845_00183 | BG845_00185 | Acryloyl-CoA reductase (NADH). | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.939 |
acrC_1 | mmsB_4 | BG845_00183 | BG845_05528 | Acryloyl-CoA reductase (NADH). | 3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family. | 0.667 |
acrC_4 | acdA_3 | BG845_04182 | BG845_01058 | Acryloyl-CoA reductase (NADH). | Acyl-CoA dehydrogenase; Overlaps another CDS with the same product name. | 0.690 |
acrC_4 | acrC_1 | BG845_04182 | BG845_00183 | Acryloyl-CoA reductase (NADH). | Acryloyl-CoA reductase (NADH). | 0.716 |
acrC_4 | echA8_1 | BG845_04182 | BG845_00184 | Acryloyl-CoA reductase (NADH). | Putative enoyl-CoA hydratase echA8. | 0.527 |
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