Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY44077.1 | fadB2_2 | BG845_00197 | BG845_00196 | Amidohydrolase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.503 |
OSY44077.1 | gltA_2 | BG845_00197 | BG845_00193 | Amidohydrolase. | Citrate synthase; Belongs to the citrate synthase family. | 0.488 |
OSY44077.1 | nrdA | BG845_00197 | BG845_00199 | Amidohydrolase. | Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.512 |
OSY44077.1 | nrdB_1 | BG845_00197 | BG845_00198 | Amidohydrolase. | Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.500 |
OSY44077.1 | prpB | BG845_00197 | BG845_00194 | Amidohydrolase. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.548 |
OSY44077.1 | prpD_1 | BG845_00197 | BG845_00195 | Amidohydrolase. | 2-methylcitrate dehydratase. | 0.493 |
fadB2_2 | OSY44077.1 | BG845_00196 | BG845_00197 | 3-hydroxybutyryl-CoA dehydrogenase. | Amidohydrolase. | 0.503 |
fadB2_2 | gltA_2 | BG845_00196 | BG845_00193 | 3-hydroxybutyryl-CoA dehydrogenase. | Citrate synthase; Belongs to the citrate synthase family. | 0.826 |
fadB2_2 | nrdA | BG845_00196 | BG845_00199 | 3-hydroxybutyryl-CoA dehydrogenase. | Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.413 |
fadB2_2 | prpB | BG845_00196 | BG845_00194 | 3-hydroxybutyryl-CoA dehydrogenase. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.777 |
fadB2_2 | prpD_1 | BG845_00196 | BG845_00195 | 3-hydroxybutyryl-CoA dehydrogenase. | 2-methylcitrate dehydratase. | 0.781 |
gltA_2 | OSY44077.1 | BG845_00193 | BG845_00197 | Citrate synthase; Belongs to the citrate synthase family. | Amidohydrolase. | 0.488 |
gltA_2 | fadB2_2 | BG845_00193 | BG845_00196 | Citrate synthase; Belongs to the citrate synthase family. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.826 |
gltA_2 | prpB | BG845_00193 | BG845_00194 | Citrate synthase; Belongs to the citrate synthase family. | Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. | 0.967 |
gltA_2 | prpD_1 | BG845_00193 | BG845_00195 | Citrate synthase; Belongs to the citrate synthase family. | 2-methylcitrate dehydratase. | 0.969 |
nrdA | OSY44077.1 | BG845_00199 | BG845_00197 | Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Amidohydrolase. | 0.512 |
nrdA | fadB2_2 | BG845_00199 | BG845_00196 | Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.413 |
nrdA | nrdB_1 | BG845_00199 | BG845_00198 | Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |
nrdA | prpD_1 | BG845_00199 | BG845_00195 | Ribonucleoside-diphosphate reductase 1 subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 2-methylcitrate dehydratase. | 0.419 |
nrdB_1 | OSY44077.1 | BG845_00198 | BG845_00197 | Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Amidohydrolase. | 0.500 |
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