STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA_1Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (363 aa)    
Predicted Functional Partners:
cysW_1
Sulfate transport system permease protein CysW; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.999
modA
Molybdate-binding periplasmic protein precursor.
 
 0.945
OSY44117.1
Helix-turn-helix domain protein.
 
  
 0.940
cysNC
Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.935
yheI_2
Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI.
 
    
0.920
bmrA
Multidrug resistance ABC transporter ATP-binding/permease protein BmrA.
 
    
0.909
irtB_2
Iron import ATP-binding/permease protein IrtB.
 
    
0.908
irtA_3
Iron import ATP-binding/permease protein IrtA.
 
    
0.907
irtA_1
Iron import ATP-binding/permease protein IrtA.
 
    
0.905
irtB_1
Iron import ATP-binding/permease protein IrtB.
 
    
0.905
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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