Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36028.1 | OSY44143.1 | BG845_05710 | BG845_00264 | ParB-like nuclease domain protein. | Hypothetical protein. | 0.487 |
OSY36028.1 | ligB_1 | BG845_05710 | BG845_02776 | ParB-like nuclease domain protein. | Protocatechuate 4,5-dioxygenase beta chain. | 0.639 |
OSY39050.1 | OSY44143.1 | BG845_03619 | BG845_00264 | Hypothetical protein. | Hypothetical protein. | 0.546 |
OSY44136.1 | OSY44143.1 | BG845_00257 | BG845_00264 | MarR family protein. | Hypothetical protein. | 0.410 |
OSY44143.1 | OSY36028.1 | BG845_00264 | BG845_05710 | Hypothetical protein. | ParB-like nuclease domain protein. | 0.487 |
OSY44143.1 | OSY39050.1 | BG845_00264 | BG845_03619 | Hypothetical protein. | Hypothetical protein. | 0.546 |
OSY44143.1 | OSY44136.1 | BG845_00264 | BG845_00257 | Hypothetical protein. | MarR family protein. | 0.410 |
OSY44143.1 | gph_2 | BG845_00264 | BG845_06074 | Hypothetical protein. | Phosphoglycolate phosphatase. | 0.500 |
OSY44143.1 | ligB_1 | BG845_00264 | BG845_02776 | Hypothetical protein. | Protocatechuate 4,5-dioxygenase beta chain. | 0.519 |
OSY44143.1 | lldR_5 | BG845_00264 | BG845_06619 | Hypothetical protein. | Putative L-lactate dehydrogenase operon regulatory protein. | 0.407 |
OSY44143.1 | rhtB_1 | BG845_00264 | BG845_00263 | Hypothetical protein. | Homoserine/homoserine lactone efflux protein. | 0.572 |
OSY44143.1 | yabJ_1 | BG845_00264 | BG845_00262 | Hypothetical protein. | Enamine/imine deaminase. | 0.403 |
gph_2 | OSY44143.1 | BG845_06074 | BG845_00264 | Phosphoglycolate phosphatase. | Hypothetical protein. | 0.500 |
ligB_1 | OSY36028.1 | BG845_02776 | BG845_05710 | Protocatechuate 4,5-dioxygenase beta chain. | ParB-like nuclease domain protein. | 0.639 |
ligB_1 | OSY44143.1 | BG845_02776 | BG845_00264 | Protocatechuate 4,5-dioxygenase beta chain. | Hypothetical protein. | 0.519 |
lldR_5 | OSY44143.1 | BG845_06619 | BG845_00264 | Putative L-lactate dehydrogenase operon regulatory protein. | Hypothetical protein. | 0.407 |
rhtB_1 | OSY44143.1 | BG845_00263 | BG845_00264 | Homoserine/homoserine lactone efflux protein. | Hypothetical protein. | 0.572 |
rhtB_1 | yabJ_1 | BG845_00263 | BG845_00262 | Homoserine/homoserine lactone efflux protein. | Enamine/imine deaminase. | 0.556 |
yabJ_1 | OSY44143.1 | BG845_00262 | BG845_00264 | Enamine/imine deaminase. | Hypothetical protein. | 0.403 |
yabJ_1 | rhtB_1 | BG845_00262 | BG845_00263 | Enamine/imine deaminase. | Homoserine/homoserine lactone efflux protein. | 0.556 |