Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY38070.1 | OSY44179.1 | BG845_04243 | BG845_00300 | Glyoxalase-like domain protein. | TMAO/DMSO reductase. | 0.487 |
OSY39424.1 | OSY44179.1 | BG845_03369 | BG845_00300 | Glyoxalase-like domain protein. | TMAO/DMSO reductase. | 0.506 |
OSY44178.1 | OSY44179.1 | BG845_00299 | BG845_00300 | Hypothetical protein. | TMAO/DMSO reductase. | 0.791 |
OSY44178.1 | lcfB_2 | BG845_00299 | BG845_00298 | Hypothetical protein. | Long-chain-fatty-acid--CoA ligase. | 0.773 |
OSY44178.1 | moeZ_1 | BG845_00299 | BG845_01402 | Hypothetical protein. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.421 |
OSY44178.1 | qcrC | BG845_00299 | BG845_04788 | Hypothetical protein. | Menaquinol-cytochrome c reductase cytochrome c subunit. | 0.510 |
OSY44179.1 | OSY38070.1 | BG845_00300 | BG845_04243 | TMAO/DMSO reductase. | Glyoxalase-like domain protein. | 0.487 |
OSY44179.1 | OSY39424.1 | BG845_00300 | BG845_03369 | TMAO/DMSO reductase. | Glyoxalase-like domain protein. | 0.506 |
OSY44179.1 | OSY44178.1 | BG845_00300 | BG845_00299 | TMAO/DMSO reductase. | Hypothetical protein. | 0.791 |
OSY44179.1 | lcfB_2 | BG845_00300 | BG845_00298 | TMAO/DMSO reductase. | Long-chain-fatty-acid--CoA ligase. | 0.782 |
OSY44179.1 | moeZ_1 | BG845_00300 | BG845_01402 | TMAO/DMSO reductase. | Putative adenylyltransferase/sulfurtransferase MoeZ. | 0.414 |
OSY44179.1 | qcrC | BG845_00300 | BG845_04788 | TMAO/DMSO reductase. | Menaquinol-cytochrome c reductase cytochrome c subunit. | 0.484 |
lcfB_2 | OSY44178.1 | BG845_00298 | BG845_00299 | Long-chain-fatty-acid--CoA ligase. | Hypothetical protein. | 0.773 |
lcfB_2 | OSY44179.1 | BG845_00298 | BG845_00300 | Long-chain-fatty-acid--CoA ligase. | TMAO/DMSO reductase. | 0.782 |
moeZ_1 | OSY44178.1 | BG845_01402 | BG845_00299 | Putative adenylyltransferase/sulfurtransferase MoeZ. | Hypothetical protein. | 0.421 |
moeZ_1 | OSY44179.1 | BG845_01402 | BG845_00300 | Putative adenylyltransferase/sulfurtransferase MoeZ. | TMAO/DMSO reductase. | 0.414 |
qcrC | OSY44178.1 | BG845_04788 | BG845_00299 | Menaquinol-cytochrome c reductase cytochrome c subunit. | Hypothetical protein. | 0.510 |
qcrC | OSY44179.1 | BG845_04788 | BG845_00300 | Menaquinol-cytochrome c reductase cytochrome c subunit. | TMAO/DMSO reductase. | 0.484 |