Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FadE7 | OSY44203.1 | BG845_00328 | BG845_00324 | Acyl-CoA dehydrogenase, short-chain specific. | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | 0.621 |
FadE7 | acrC_2 | BG845_00328 | BG845_00330 | Acyl-CoA dehydrogenase, short-chain specific. | Acryloyl-CoA reductase (NADH). | 0.744 |
FadE7 | echA8_4 | BG845_00328 | BG845_00325 | Acyl-CoA dehydrogenase, short-chain specific. | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.941 |
FadE7 | fabG_2 | BG845_00328 | BG845_00329 | Acyl-CoA dehydrogenase, short-chain specific. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.809 |
FadE7 | lcfB_16 | BG845_00328 | BG845_04165 | Acyl-CoA dehydrogenase, short-chain specific. | Long-chain-fatty-acid--CoA ligase. | 0.499 |
FadE7 | lcfB_3 | BG845_00328 | BG845_00326 | Acyl-CoA dehydrogenase, short-chain specific. | Long-chain-fatty-acid--CoA ligase. | 0.712 |
FadE7 | menB_1 | BG845_00328 | BG845_00323 | Acyl-CoA dehydrogenase, short-chain specific. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.595 |
FadE7 | mmgC_1 | BG845_00328 | BG845_00327 | Acyl-CoA dehydrogenase, short-chain specific. | Acyl-CoA dehydrogenase. | 0.978 |
OSY44203.1 | FadE7 | BG845_00324 | BG845_00328 | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | Acyl-CoA dehydrogenase, short-chain specific. | 0.621 |
OSY44203.1 | acrC_2 | BG845_00324 | BG845_00330 | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | Acryloyl-CoA reductase (NADH). | 0.544 |
OSY44203.1 | echA8_4 | BG845_00324 | BG845_00325 | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.709 |
OSY44203.1 | fabG_2 | BG845_00324 | BG845_00329 | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.593 |
OSY44203.1 | lcfB_3 | BG845_00324 | BG845_00326 | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | Long-chain-fatty-acid--CoA ligase. | 0.709 |
OSY44203.1 | menB_1 | BG845_00324 | BG845_00323 | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.723 |
OSY44203.1 | mmgC_1 | BG845_00324 | BG845_00327 | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | Acyl-CoA dehydrogenase. | 0.621 |
acrC_2 | FadE7 | BG845_00330 | BG845_00328 | Acryloyl-CoA reductase (NADH). | Acyl-CoA dehydrogenase, short-chain specific. | 0.744 |
acrC_2 | OSY44203.1 | BG845_00330 | BG845_00324 | Acryloyl-CoA reductase (NADH). | Aminoglycoside/hydroxyurea antibiotic resistance kinase. | 0.544 |
acrC_2 | echA8_4 | BG845_00330 | BG845_00325 | Acryloyl-CoA reductase (NADH). | Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.797 |
acrC_2 | fabG_2 | BG845_00330 | BG845_00329 | Acryloyl-CoA reductase (NADH). | 3-oxoacyl-[acyl-carrier-protein] reductase FabG. | 0.838 |
acrC_2 | lcfB_16 | BG845_00330 | BG845_04165 | Acryloyl-CoA reductase (NADH). | Long-chain-fatty-acid--CoA ligase. | 0.499 |
page 1 of 4