Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
apc3_1 | apc4_1 | BG845_00351 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.992 |
apc3_1 | tadA_2 | BG845_00351 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_10 | apc4_1 | BG845_06459 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.936 |
apc3_10 | tadA_2 | BG845_06459 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_2 | apc3_3 | BG845_00803 | BG845_00805 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase gamma subunit. | 0.816 |
apc3_2 | apc4_1 | BG845_00803 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.968 |
apc3_2 | tadA_2 | BG845_00803 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_3 | apc3_2 | BG845_00805 | BG845_00803 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase gamma subunit. | 0.816 |
apc3_3 | apc4_1 | BG845_00805 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.877 |
apc3_3 | tadA_2 | BG845_00805 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_4 | apc4_1 | BG845_00968 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.918 |
apc3_4 | tadA_2 | BG845_00968 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_5 | apc4_1 | BG845_01590 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.967 |
apc3_5 | tadA_2 | BG845_01590 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_6 | apc4_1 | BG845_02395 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.961 |
apc3_6 | tadA_2 | BG845_02395 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_7 | apc4_1 | BG845_04083 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.972 |
apc3_7 | tadA_2 | BG845_04083 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
apc3_8 | apc4_1 | BG845_06012 | BG845_00352 | Acetophenone carboxylase gamma subunit. | Acetophenone carboxylase delta subunit. | 0.949 |
apc3_8 | tadA_2 | BG845_06012 | BG845_02353 | Acetophenone carboxylase gamma subunit. | tRNA-specific adenosine deaminase. | 0.900 |
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