STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY43489.1Membrane protein FdrA. (519 aa)    
Predicted Functional Partners:
sucC
Succinyl-CoA ligase [ADP-forming] subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
  
 0.979
OSY42104.1
Hypothetical protein.
     0.978
OSY43481.1
Hypothetical protein.
     0.977
kgd
Multifunctional 2-oxoglutarate metabolism enzyme.
  
 
 0.963
arcC1
Carbamate kinase 1; Belongs to the carbamate kinase family.
 
  
 0.930
OSY43482.1
Hypothetical protein.
 
 
 0.834
pimA_1
GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase.
     
 0.780
arcC2
Carbamate kinase 2; Belongs to the carbamate kinase family.
 
  
 0.754
OSY42102.1
Hypothetical protein.
 
 
 0.747
OSY43487.1
Hypothetical protein.
       0.737
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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