Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY39632.1 | OSY43611.1 | BG845_03229 | BG845_00554 | Hypothetical protein. | Methylenetetrahydromethanopterin reductase. | 0.433 |
OSY43496.1 | OSY43611.1 | BG845_00439 | BG845_00554 | Chromosome segregation protein. | Methylenetetrahydromethanopterin reductase. | 0.401 |
OSY43611.1 | OSY39632.1 | BG845_00554 | BG845_03229 | Methylenetetrahydromethanopterin reductase. | Hypothetical protein. | 0.433 |
OSY43611.1 | OSY43496.1 | BG845_00554 | BG845_00439 | Methylenetetrahydromethanopterin reductase. | Chromosome segregation protein. | 0.401 |
OSY43611.1 | OSY43615.1 | BG845_00554 | BG845_00558 | Methylenetetrahydromethanopterin reductase. | ABC-2 family transporter protein. | 0.491 |
OSY43611.1 | desK_1 | BG845_00554 | BG845_00556 | Methylenetetrahydromethanopterin reductase. | Sensor histidine kinase DesK. | 0.737 |
OSY43611.1 | drrA_1 | BG845_00554 | BG845_00557 | Methylenetetrahydromethanopterin reductase. | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. | 0.491 |
OSY43611.1 | vraR_2 | BG845_00554 | BG845_00555 | Methylenetetrahydromethanopterin reductase. | Response regulator protein VraR. | 0.761 |
OSY43615.1 | OSY43611.1 | BG845_00558 | BG845_00554 | ABC-2 family transporter protein. | Methylenetetrahydromethanopterin reductase. | 0.491 |
OSY43615.1 | desK_1 | BG845_00558 | BG845_00556 | ABC-2 family transporter protein. | Sensor histidine kinase DesK. | 0.634 |
OSY43615.1 | drrA_1 | BG845_00558 | BG845_00557 | ABC-2 family transporter protein. | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. | 0.933 |
OSY43615.1 | vraR_2 | BG845_00558 | BG845_00555 | ABC-2 family transporter protein. | Response regulator protein VraR. | 0.650 |
desK_1 | OSY43611.1 | BG845_00556 | BG845_00554 | Sensor histidine kinase DesK. | Methylenetetrahydromethanopterin reductase. | 0.737 |
desK_1 | OSY43615.1 | BG845_00556 | BG845_00558 | Sensor histidine kinase DesK. | ABC-2 family transporter protein. | 0.634 |
desK_1 | drrA_1 | BG845_00556 | BG845_00557 | Sensor histidine kinase DesK. | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. | 0.622 |
desK_1 | vraR_2 | BG845_00556 | BG845_00555 | Sensor histidine kinase DesK. | Response regulator protein VraR. | 0.995 |
drrA_1 | OSY43611.1 | BG845_00557 | BG845_00554 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. | Methylenetetrahydromethanopterin reductase. | 0.491 |
drrA_1 | OSY43615.1 | BG845_00557 | BG845_00558 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. | ABC-2 family transporter protein. | 0.933 |
drrA_1 | desK_1 | BG845_00557 | BG845_00556 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. | Sensor histidine kinase DesK. | 0.622 |
drrA_1 | vraR_2 | BG845_00557 | BG845_00555 | Daunorubicin/doxorubicin resistance ATP-binding protein DrrA. | Response regulator protein VraR. | 0.617 |
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