Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY34711.1 | OSY43648.1 | BG845_06599 | BG845_00594 | NHL repeat protein. | Homoserine dehydrogenase. | 0.464 |
OSY43648.1 | OSY34711.1 | BG845_00594 | BG845_06599 | Homoserine dehydrogenase. | NHL repeat protein. | 0.464 |
OSY43648.1 | galE_2 | BG845_00594 | BG845_04523 | Homoserine dehydrogenase. | UDP-glucose 4-epimerase. | 0.544 |
OSY43648.1 | rfbC | BG845_00594 | BG845_00593 | Homoserine dehydrogenase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.864 |
OSY43648.1 | rfbF_1 | BG845_00594 | BG845_00585 | Homoserine dehydrogenase. | Glucose-1-phosphate cytidylyltransferase. | 0.428 |
OSY43648.1 | rfbF_2 | BG845_00594 | BG845_04525 | Homoserine dehydrogenase. | Glucose-1-phosphate cytidylyltransferase. | 0.403 |
OSY43648.1 | ubiB_1 | BG845_00594 | BG845_00592 | Homoserine dehydrogenase. | Putative protein kinase UbiB. | 0.533 |
galE_2 | OSY43648.1 | BG845_04523 | BG845_00594 | UDP-glucose 4-epimerase. | Homoserine dehydrogenase. | 0.544 |
galE_2 | rfbC | BG845_04523 | BG845_00593 | UDP-glucose 4-epimerase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.510 |
galE_2 | rfbF_1 | BG845_04523 | BG845_00585 | UDP-glucose 4-epimerase. | Glucose-1-phosphate cytidylyltransferase. | 0.833 |
galE_2 | rfbF_2 | BG845_04523 | BG845_04525 | UDP-glucose 4-epimerase. | Glucose-1-phosphate cytidylyltransferase. | 0.947 |
rfbC | OSY43648.1 | BG845_00593 | BG845_00594 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Homoserine dehydrogenase. | 0.864 |
rfbC | galE_2 | BG845_00593 | BG845_04523 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | UDP-glucose 4-epimerase. | 0.510 |
rfbC | rfbF_1 | BG845_00593 | BG845_00585 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Glucose-1-phosphate cytidylyltransferase. | 0.773 |
rfbC | rfbF_2 | BG845_00593 | BG845_04525 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Glucose-1-phosphate cytidylyltransferase. | 0.685 |
rfbC | ubiB_1 | BG845_00593 | BG845_00592 | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | Putative protein kinase UbiB. | 0.535 |
rfbF_1 | OSY43648.1 | BG845_00585 | BG845_00594 | Glucose-1-phosphate cytidylyltransferase. | Homoserine dehydrogenase. | 0.428 |
rfbF_1 | galE_2 | BG845_00585 | BG845_04523 | Glucose-1-phosphate cytidylyltransferase. | UDP-glucose 4-epimerase. | 0.833 |
rfbF_1 | rfbC | BG845_00585 | BG845_00593 | Glucose-1-phosphate cytidylyltransferase. | dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.773 |
rfbF_1 | rfbF_2 | BG845_00585 | BG845_04525 | Glucose-1-phosphate cytidylyltransferase. | Glucose-1-phosphate cytidylyltransferase. | 0.916 |
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