Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY38737.1 | OSY43078.1 | BG845_03940 | BG845_00683 | MarR family protein. | Manganese transport regulator MntR. | 0.701 |
OSY43078.1 | OSY38737.1 | BG845_00683 | BG845_03940 | Manganese transport regulator MntR. | MarR family protein. | 0.701 |
OSY43078.1 | OSY43079.1 | BG845_00683 | BG845_00684 | Manganese transport regulator MntR. | Hypothetical protein. | 0.522 |
OSY43078.1 | pknA_1 | BG845_00683 | BG845_00682 | Manganese transport regulator MntR. | Serine/threonine-protein kinase PknA. | 0.541 |
OSY43078.1 | rpf2_2 | BG845_00683 | BG845_03996 | Manganese transport regulator MntR. | Resuscitation-promoting factor Rpf2 precursor. | 0.409 |
OSY43079.1 | OSY43078.1 | BG845_00684 | BG845_00683 | Hypothetical protein. | Manganese transport regulator MntR. | 0.522 |
pknA_1 | OSY43078.1 | BG845_00682 | BG845_00683 | Serine/threonine-protein kinase PknA. | Manganese transport regulator MntR. | 0.541 |
rpf2_2 | OSY43078.1 | BG845_03996 | BG845_00683 | Resuscitation-promoting factor Rpf2 precursor. | Manganese transport regulator MntR. | 0.409 |