Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35553.1 | OSY43079.1 | BG845_05993 | BG845_00684 | SnoaL-like polyketide cyclase. | Hypothetical protein. | 0.419 |
OSY43078.1 | OSY43079.1 | BG845_00683 | BG845_00684 | Manganese transport regulator MntR. | Hypothetical protein. | 0.522 |
OSY43079.1 | OSY35553.1 | BG845_00684 | BG845_05993 | Hypothetical protein. | SnoaL-like polyketide cyclase. | 0.419 |
OSY43079.1 | OSY43078.1 | BG845_00684 | BG845_00683 | Hypothetical protein. | Manganese transport regulator MntR. | 0.522 |
OSY43079.1 | egtD | BG845_00684 | BG845_03631 | Hypothetical protein. | Histidine-specific methyltransferase EgtD; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | 0.453 |
egtD | OSY43079.1 | BG845_03631 | BG845_00684 | Histidine-specific methyltransferase EgtD; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family. | Hypothetical protein. | 0.453 |