Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY43171.1 | appA_1 | BG845_00776 | BG845_00780 | Transcriptional regulator BetI. | Oligopeptide-binding protein AppA precursor. | 0.770 |
OSY43171.1 | dppB_1 | BG845_00776 | BG845_00781 | Transcriptional regulator BetI. | Dipeptide transport system permease protein DppB. | 0.706 |
OSY43171.1 | gsiD_2 | BG845_00776 | BG845_00782 | Transcriptional regulator BetI. | Glutathione transport system permease protein GsiD. | 0.719 |
OSY43171.1 | kce_2 | BG845_00776 | BG845_00777 | Transcriptional regulator BetI. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.855 |
OSY43171.1 | lcdH_1 | BG845_00776 | BG845_00778 | Transcriptional regulator BetI. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.859 |
OSY43171.1 | lcdH_2 | BG845_00776 | BG845_00779 | Transcriptional regulator BetI. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.865 |
appA_1 | OSY43171.1 | BG845_00780 | BG845_00776 | Oligopeptide-binding protein AppA precursor. | Transcriptional regulator BetI. | 0.770 |
appA_1 | dppB_1 | BG845_00780 | BG845_00781 | Oligopeptide-binding protein AppA precursor. | Dipeptide transport system permease protein DppB. | 0.969 |
appA_1 | gsiD_2 | BG845_00780 | BG845_00782 | Oligopeptide-binding protein AppA precursor. | Glutathione transport system permease protein GsiD. | 0.974 |
appA_1 | kce_2 | BG845_00780 | BG845_00777 | Oligopeptide-binding protein AppA precursor. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.744 |
appA_1 | lcdH_1 | BG845_00780 | BG845_00778 | Oligopeptide-binding protein AppA precursor. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.713 |
appA_1 | lcdH_2 | BG845_00780 | BG845_00779 | Oligopeptide-binding protein AppA precursor. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.779 |
dppB_1 | OSY43171.1 | BG845_00781 | BG845_00776 | Dipeptide transport system permease protein DppB. | Transcriptional regulator BetI. | 0.706 |
dppB_1 | appA_1 | BG845_00781 | BG845_00780 | Dipeptide transport system permease protein DppB. | Oligopeptide-binding protein AppA precursor. | 0.969 |
dppB_1 | gsiD_2 | BG845_00781 | BG845_00782 | Dipeptide transport system permease protein DppB. | Glutathione transport system permease protein GsiD. | 0.970 |
dppB_1 | kce_2 | BG845_00781 | BG845_00777 | Dipeptide transport system permease protein DppB. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.695 |
dppB_1 | lcdH_1 | BG845_00781 | BG845_00778 | Dipeptide transport system permease protein DppB. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.676 |
dppB_1 | lcdH_2 | BG845_00781 | BG845_00779 | Dipeptide transport system permease protein DppB. | L-carnitine dehydrogenase; Overlaps another CDS with the same product name. | 0.708 |
gsiD_2 | OSY43171.1 | BG845_00782 | BG845_00776 | Glutathione transport system permease protein GsiD. | Transcriptional regulator BetI. | 0.719 |
gsiD_2 | appA_1 | BG845_00782 | BG845_00780 | Glutathione transport system permease protein GsiD. | Oligopeptide-binding protein AppA precursor. | 0.974 |
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