Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
clcD_2 | galM | BG845_01636 | BG845_00786 | Carboxymethylenebutenolidase. | Aldose 1-epimerase. | 0.585 |
dacC | galM | BG845_03050 | BG845_00786 | D-alanyl-D-alanine carboxypeptidase DacC precursor. | Aldose 1-epimerase. | 0.546 |
galK | galM | BG845_00796 | BG845_00786 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Aldose 1-epimerase. | 0.986 |
galK | galT | BG845_00796 | BG845_04479 | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | Galactose-1-phosphate uridylyltransferase. | 0.999 |
galM | clcD_2 | BG845_00786 | BG845_01636 | Aldose 1-epimerase. | Carboxymethylenebutenolidase. | 0.585 |
galM | dacC | BG845_00786 | BG845_03050 | Aldose 1-epimerase. | D-alanyl-D-alanine carboxypeptidase DacC precursor. | 0.546 |
galM | galK | BG845_00786 | BG845_00796 | Aldose 1-epimerase. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.986 |
galM | galT | BG845_00786 | BG845_04479 | Aldose 1-epimerase. | Galactose-1-phosphate uridylyltransferase. | 0.769 |
galM | glkA_2 | BG845_00786 | BG845_04803 | Aldose 1-epimerase. | Glucokinase. | 0.911 |
galM | glkA_3 | BG845_00786 | BG845_05452 | Aldose 1-epimerase. | Glucokinase. | 0.911 |
galM | ppgK | BG845_00786 | BG845_00773 | Aldose 1-epimerase. | Polyphosphate glucokinase. | 0.911 |
galM | recF_1 | BG845_00786 | BG845_00787 | Aldose 1-epimerase. | DNA replication and repair protein RecF. | 0.694 |
galM | rutE | BG845_00786 | BG845_00785 | Aldose 1-epimerase. | Putative malonic semialdehyde reductase RutE. | 0.637 |
galM | yhaO | BG845_00786 | BG845_00788 | Aldose 1-epimerase. | Putative metallophosphoesterase YhaO. | 0.699 |
galT | galK | BG845_04479 | BG845_00796 | Galactose-1-phosphate uridylyltransferase. | Galactokinase; Belongs to the GHMP kinase family. GalK subfamily. | 0.999 |
galT | galM | BG845_04479 | BG845_00786 | Galactose-1-phosphate uridylyltransferase. | Aldose 1-epimerase. | 0.769 |
glkA_2 | galM | BG845_04803 | BG845_00786 | Glucokinase. | Aldose 1-epimerase. | 0.911 |
glkA_2 | glkA_3 | BG845_04803 | BG845_05452 | Glucokinase. | Glucokinase. | 0.920 |
glkA_2 | ppgK | BG845_04803 | BG845_00773 | Glucokinase. | Polyphosphate glucokinase. | 0.947 |
glkA_3 | galM | BG845_05452 | BG845_00786 | Glucokinase. | Aldose 1-epimerase. | 0.911 |
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