STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY43292.1Hypothetical protein. (426 aa)    
Predicted Functional Partners:
OSY43291.1
Hypothetical protein.
 
 
 0.992
OSY43293.1
Putative FAD-binding dehydrogenase.
 
     0.858
OSY43290.1
NMT1/THI5 like protein.
 
     0.846
OSY39700.1
NMT1/THI5 like protein.
 
     0.696
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
 
     0.676
ssuC_1
Putative aliphatic sulfonates transport permease protein SsuC.
       0.581
leuO
HTH-type transcriptional regulator LeuO; Belongs to the LysR transcriptional regulatory family.
       0.450
dmfA2
N,N-dimethylformamidase beta subunit.
  
     0.423
comC_1
(2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.408
comC_2
(2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family.
 
   
 0.405
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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