Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY41491.1 | adh_1 | BG845_01982 | BG845_01031 | Quinone oxidoreductase, NADPH-dependent. | Alcohol dehydrogenase. | 0.525 |
OSY41491.1 | lcfB_16 | BG845_01982 | BG845_04165 | Quinone oxidoreductase, NADPH-dependent. | Long-chain-fatty-acid--CoA ligase. | 0.500 |
OSY41491.1 | ppsC_1 | BG845_01982 | BG845_01244 | Quinone oxidoreductase, NADPH-dependent. | Phthiocerol synthesis polyketide synthase type I PpsC. | 0.626 |
OSY42789.1 | OSY42792.1 | BG845_01030 | BG845_01033 | Pyridoxamine 5'-phosphate oxidase. | Hypothetical protein. | 0.498 |
OSY42789.1 | adh_1 | BG845_01030 | BG845_01031 | Pyridoxamine 5'-phosphate oxidase. | Alcohol dehydrogenase. | 0.774 |
OSY42789.1 | pcpB_2 | BG845_01030 | BG845_01032 | Pyridoxamine 5'-phosphate oxidase. | Pentachlorophenol 4-monooxygenase. | 0.526 |
OSY42789.1 | proP_2 | BG845_01030 | BG845_01029 | Pyridoxamine 5'-phosphate oxidase. | Proline/betaine transporter. | 0.588 |
OSY42792.1 | OSY42789.1 | BG845_01033 | BG845_01030 | Hypothetical protein. | Pyridoxamine 5'-phosphate oxidase. | 0.498 |
OSY42792.1 | adh_1 | BG845_01033 | BG845_01031 | Hypothetical protein. | Alcohol dehydrogenase. | 0.498 |
OSY42792.1 | pcpB_2 | BG845_01033 | BG845_01032 | Hypothetical protein. | Pentachlorophenol 4-monooxygenase. | 0.741 |
adh_1 | OSY41491.1 | BG845_01031 | BG845_01982 | Alcohol dehydrogenase. | Quinone oxidoreductase, NADPH-dependent. | 0.525 |
adh_1 | OSY42789.1 | BG845_01031 | BG845_01030 | Alcohol dehydrogenase. | Pyridoxamine 5'-phosphate oxidase. | 0.774 |
adh_1 | OSY42792.1 | BG845_01031 | BG845_01033 | Alcohol dehydrogenase. | Hypothetical protein. | 0.498 |
adh_1 | lcfB_16 | BG845_01031 | BG845_04165 | Alcohol dehydrogenase. | Long-chain-fatty-acid--CoA ligase. | 0.500 |
adh_1 | neoA_1 | BG845_01031 | BG845_01609 | Alcohol dehydrogenase. | 2-deoxy-scyllo-inosamine dehydrogenase. | 0.507 |
adh_1 | neoA_3 | BG845_01031 | BG845_05780 | Alcohol dehydrogenase. | 2-deoxy-scyllo-inosamine dehydrogenase. | 0.402 |
adh_1 | pcpB_2 | BG845_01031 | BG845_01032 | Alcohol dehydrogenase. | Pentachlorophenol 4-monooxygenase. | 0.556 |
adh_1 | ppsC_1 | BG845_01031 | BG845_01244 | Alcohol dehydrogenase. | Phthiocerol synthesis polyketide synthase type I PpsC. | 0.713 |
adh_1 | proP_2 | BG845_01031 | BG845_01029 | Alcohol dehydrogenase. | Proline/betaine transporter. | 0.588 |
lcfB_16 | OSY41491.1 | BG845_04165 | BG845_01982 | Long-chain-fatty-acid--CoA ligase. | Quinone oxidoreductase, NADPH-dependent. | 0.500 |
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