Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY34943.1 | OSY37114.1 | BG845_06398 | BG845_04997 | Putative diacylglycerol O-acyltransferase/MT2557. | Phosphotransferase enzyme family protein. | 0.541 |
OSY34943.1 | OSY42833.1 | BG845_06398 | BG845_01074 | Putative diacylglycerol O-acyltransferase/MT2557. | SnoaL-like domain protein. | 0.422 |
OSY37114.1 | OSY34943.1 | BG845_04997 | BG845_06398 | Phosphotransferase enzyme family protein. | Putative diacylglycerol O-acyltransferase/MT2557. | 0.541 |
OSY37114.1 | OSY42833.1 | BG845_04997 | BG845_01074 | Phosphotransferase enzyme family protein. | SnoaL-like domain protein. | 0.518 |
OSY38007.1 | OSY42833.1 | BG845_04414 | BG845_01074 | Dihydroorotase. | SnoaL-like domain protein. | 0.445 |
OSY38007.1 | luxA_4 | BG845_04414 | BG845_01076 | Dihydroorotase. | Alkanal monooxygenase alpha chain. | 0.413 |
OSY42833.1 | OSY34943.1 | BG845_01074 | BG845_06398 | SnoaL-like domain protein. | Putative diacylglycerol O-acyltransferase/MT2557. | 0.422 |
OSY42833.1 | OSY37114.1 | BG845_01074 | BG845_04997 | SnoaL-like domain protein. | Phosphotransferase enzyme family protein. | 0.518 |
OSY42833.1 | OSY38007.1 | BG845_01074 | BG845_04414 | SnoaL-like domain protein. | Dihydroorotase. | 0.445 |
OSY42833.1 | cdaR_1 | BG845_01074 | BG845_01077 | SnoaL-like domain protein. | Carbohydrate diacid regulator. | 0.671 |
OSY42833.1 | kstR2_8 | BG845_01074 | BG845_01075 | SnoaL-like domain protein. | HTH-type transcriptional repressor KstR2. | 0.774 |
OSY42833.1 | luxA_3 | BG845_01074 | BG845_01071 | SnoaL-like domain protein. | Alkanal monooxygenase alpha chain. | 0.668 |
OSY42833.1 | luxA_4 | BG845_01074 | BG845_01076 | SnoaL-like domain protein. | Alkanal monooxygenase alpha chain. | 0.828 |
cdaR_1 | OSY42833.1 | BG845_01077 | BG845_01074 | Carbohydrate diacid regulator. | SnoaL-like domain protein. | 0.671 |
cdaR_1 | kstR2_8 | BG845_01077 | BG845_01075 | Carbohydrate diacid regulator. | HTH-type transcriptional repressor KstR2. | 0.495 |
cdaR_1 | luxA_3 | BG845_01077 | BG845_01071 | Carbohydrate diacid regulator. | Alkanal monooxygenase alpha chain. | 0.427 |
cdaR_1 | luxA_4 | BG845_01077 | BG845_01076 | Carbohydrate diacid regulator. | Alkanal monooxygenase alpha chain. | 0.629 |
kstR2_8 | OSY42833.1 | BG845_01075 | BG845_01074 | HTH-type transcriptional repressor KstR2. | SnoaL-like domain protein. | 0.774 |
kstR2_8 | cdaR_1 | BG845_01075 | BG845_01077 | HTH-type transcriptional repressor KstR2. | Carbohydrate diacid regulator. | 0.495 |
kstR2_8 | luxA_4 | BG845_01075 | BG845_01076 | HTH-type transcriptional repressor KstR2. | Alkanal monooxygenase alpha chain. | 0.615 |
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