Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
kdgR_2 | kdgR_3 | BG845_01037 | BG845_01101 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.760 |
kdgR_3 | kdgR_2 | BG845_01101 | BG845_01037 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.760 |
kdgR_3 | kdgR_4 | BG845_01101 | BG845_02495 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.764 |
kdgR_3 | kdgR_6 | BG845_01101 | BG845_03311 | Transcriptional regulator KdgR. | Pectin degradation repressor protein KdgR. | 0.761 |
kdgR_3 | kdgR_7 | BG845_01101 | BG845_03612 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.761 |
kdgR_3 | kdgR_8 | BG845_01101 | BG845_03627 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.761 |
kdgR_3 | kdgR_9 | BG845_01101 | BG845_04484 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.760 |
kdgR_3 | kipR_3 | BG845_01101 | BG845_01498 | Transcriptional regulator KdgR. | HTH-type transcriptional regulator KipR. | 0.763 |
kdgR_3 | kipR_5 | BG845_01101 | BG845_06520 | Transcriptional regulator KdgR. | HTH-type transcriptional regulator KipR. | 0.761 |
kdgR_3 | pcaR_2 | BG845_01101 | BG845_03625 | Transcriptional regulator KdgR. | Pca regulon regulatory protein. | 0.762 |
kdgR_3 | yhdG_2 | BG845_01101 | BG845_01100 | Transcriptional regulator KdgR. | Putative amino acid permease YhdG. | 0.803 |
kdgR_4 | kdgR_3 | BG845_02495 | BG845_01101 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.764 |
kdgR_6 | kdgR_3 | BG845_03311 | BG845_01101 | Pectin degradation repressor protein KdgR. | Transcriptional regulator KdgR. | 0.761 |
kdgR_7 | kdgR_3 | BG845_03612 | BG845_01101 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.761 |
kdgR_8 | kdgR_3 | BG845_03627 | BG845_01101 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.761 |
kdgR_9 | kdgR_3 | BG845_04484 | BG845_01101 | Transcriptional regulator KdgR. | Transcriptional regulator KdgR. | 0.760 |
kipR_3 | kdgR_3 | BG845_01498 | BG845_01101 | HTH-type transcriptional regulator KipR. | Transcriptional regulator KdgR. | 0.763 |
kipR_5 | kdgR_3 | BG845_06520 | BG845_01101 | HTH-type transcriptional regulator KipR. | Transcriptional regulator KdgR. | 0.761 |
pcaR_2 | kdgR_3 | BG845_03625 | BG845_01101 | Pca regulon regulatory protein. | Transcriptional regulator KdgR. | 0.762 |
yhdG_2 | kdgR_3 | BG845_01100 | BG845_01101 | Putative amino acid permease YhdG. | Transcriptional regulator KdgR. | 0.803 |