Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY42860.1 | comC_1 | BG845_01102 | BG845_01103 | Hypothetical protein. | (2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family. | 0.508 |
OSY42860.1 | siaT_1 | BG845_01102 | BG845_01106 | Hypothetical protein. | Sialic acid TRAP transporter permease protein SiaT. | 0.417 |
OSY42860.1 | yiaM_1 | BG845_01102 | BG845_01105 | Hypothetical protein. | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | 0.417 |
OSY42860.1 | yiaO_1 | BG845_01102 | BG845_01104 | Hypothetical protein. | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor. | 0.417 |
OSY42865.1 | OSY42866.1 | BG845_01107 | BG845_01108 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Fumarylacetoacetate (FAA) hydrolase family protein. | 0.861 |
OSY42865.1 | OSY42867.1 | BG845_01107 | BG845_01109 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Transcriptional regulator NanR. | 0.624 |
OSY42865.1 | comC_1 | BG845_01107 | BG845_01103 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | (2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family. | 0.562 |
OSY42865.1 | siaT_1 | BG845_01107 | BG845_01106 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | Sialic acid TRAP transporter permease protein SiaT. | 0.685 |
OSY42865.1 | yiaM_1 | BG845_01107 | BG845_01105 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | 0.684 |
OSY42865.1 | yiaO_1 | BG845_01107 | BG845_01104 | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor. | 0.684 |
OSY42866.1 | OSY42865.1 | BG845_01108 | BG845_01107 | Fumarylacetoacetate (FAA) hydrolase family protein. | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.861 |
OSY42866.1 | OSY42867.1 | BG845_01108 | BG845_01109 | Fumarylacetoacetate (FAA) hydrolase family protein. | Transcriptional regulator NanR. | 0.662 |
OSY42866.1 | comC_1 | BG845_01108 | BG845_01103 | Fumarylacetoacetate (FAA) hydrolase family protein. | (2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family. | 0.567 |
OSY42866.1 | siaT_1 | BG845_01108 | BG845_01106 | Fumarylacetoacetate (FAA) hydrolase family protein. | Sialic acid TRAP transporter permease protein SiaT. | 0.694 |
OSY42866.1 | yiaM_1 | BG845_01108 | BG845_01105 | Fumarylacetoacetate (FAA) hydrolase family protein. | 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM. | 0.697 |
OSY42866.1 | yiaO_1 | BG845_01108 | BG845_01104 | Fumarylacetoacetate (FAA) hydrolase family protein. | 2,3-diketo-L-gulonate-binding periplasmic protein YiaO precursor. | 0.691 |
OSY42867.1 | OSY42865.1 | BG845_01109 | BG845_01107 | Transcriptional regulator NanR. | L-fuconate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.624 |
OSY42867.1 | OSY42866.1 | BG845_01109 | BG845_01108 | Transcriptional regulator NanR. | Fumarylacetoacetate (FAA) hydrolase family protein. | 0.662 |
OSY42867.1 | comC_1 | BG845_01109 | BG845_01103 | Transcriptional regulator NanR. | (2R)-3-sulfolactate dehydrogenase (NADP(+)); Belongs to the LDH2/MDH2 oxidoreductase family. | 0.453 |
OSY42867.1 | siaT_1 | BG845_01109 | BG845_01106 | Transcriptional regulator NanR. | Sialic acid TRAP transporter permease protein SiaT. | 0.551 |
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