STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ssuC_2Putative aliphatic sulfonates transport permease protein SsuC. (250 aa)    
Predicted Functional Partners:
OSY42888.1
Putative thiamine biosynthesis protein.
  
 0.969
tauB_1
Taurine import ATP-binding protein TauB.
  
 0.965
OSY37998.1
Putative thiamine biosynthesis protein.
 
  
 0.830
OSY38503.1
Putative thiamine biosynthesis protein.
 
  
 0.785
cmpD_2
Bicarbonate transport ATP-binding protein CmpD.
  
 0.764
OSY40392.1
NMT1/THI5 like protein.
 
  
 0.731
tauA_1
Taurine-binding periplasmic protein precursor.
 
  
 0.723
cmpD_1
Bicarbonate transport ATP-binding protein CmpD.
  
 0.713
ssuB_3
Aliphatic sulfonates import ATP-binding protein SsuB.
  
 0.703
ssuB_1
Aliphatic sulfonates import ATP-binding protein SsuB.
  
 0.662
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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