STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylF_1D-xylose-binding periplasmic protein precursor. (380 aa)    
Predicted Functional Partners:
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 0.984
xylH_1
Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
 
 0.980
xylG
Xylose import ATP-binding protein XylG.
  
 0.836
xylH_2
Xylose transport system permease protein XylH; Belongs to the binding-protein-dependent transport system permease family.
  
 0.830
glkA_1
Glucokinase.
 
     0.726
OSY43697.1
Hypothetical protein.
 
     0.662
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.600
yjfF
Inner membrane ABC transporter permease protein YjfF; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.589
rbsA
Ribose import ATP-binding protein RbsA.
  
 0.568
msmE
Multiple sugar-binding protein precursor.
 
  
 0.540
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.