STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY42961.1Phage Terminase. (855 aa)    
Predicted Functional Partners:
OSY42959.1
Phage portal protein.
     
 0.870
OSY42957.1
Phage capsid family protein.
     
 0.795
OSY42962.1
Hypothetical protein.
       0.773
OSY42960.1
Hypothetical protein.
       0.769
OSY42958.1
Caudovirus prohead protease.
       0.759
OSY37767.1
Hypothetical protein.
  
     0.642
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
  
 0.521
OSY42955.1
Hypothetical protein.
       0.510
OSY42949.1
Hypothetical protein.
       0.506
OSY42954.1
Hypothetical protein.
       0.506
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.