STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY42962.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
OSY42961.1
Phage Terminase.
       0.773
OSY42959.1
Phage portal protein.
       0.752
OSY42960.1
Hypothetical protein.
       0.752
OSY42958.1
Caudovirus prohead protease.
       0.678
OSY42957.1
Phage capsid family protein.
       0.668
OSY42948.1
Hypothetical protein.
       0.448
OSY42949.1
Hypothetical protein.
       0.448
OSY42950.1
Hypothetical protein.
       0.448
OSY42951.1
Hypothetical protein.
       0.448
OSY42952.1
Hypothetical protein.
       0.448
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.