Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY37409.1 | yheI_3 | BG845_04712 | BG845_04711 | Putative ABC transporter ATP-binding protein. | Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. | 0.841 |
OSY37409.1 | yxlF_1 | BG845_04712 | BG845_01323 | Putative ABC transporter ATP-binding protein. | Putative ABC transporter ATP-binding protein YxlF. | 0.710 |
OSY38257.1 | OSY39087.1 | BG845_04210 | BG845_03656 | ABC-2 family transporter protein. | Hypothetical protein. | 0.698 |
OSY38257.1 | yxlF_1 | BG845_04210 | BG845_01323 | ABC-2 family transporter protein. | Putative ABC transporter ATP-binding protein YxlF. | 0.762 |
OSY39087.1 | OSY38257.1 | BG845_03656 | BG845_04210 | Hypothetical protein. | ABC-2 family transporter protein. | 0.698 |
OSY39087.1 | OSY39089.1 | BG845_03656 | BG845_03658 | Hypothetical protein. | ABC-2 family transporter protein. | 0.948 |
OSY39087.1 | yxlF_1 | BG845_03656 | BG845_01323 | Hypothetical protein. | Putative ABC transporter ATP-binding protein YxlF. | 0.725 |
OSY39089.1 | OSY39087.1 | BG845_03658 | BG845_03656 | ABC-2 family transporter protein. | Hypothetical protein. | 0.948 |
OSY39089.1 | yxlF_1 | BG845_03658 | BG845_01323 | ABC-2 family transporter protein. | Putative ABC transporter ATP-binding protein YxlF. | 0.880 |
OSY42402.1 | yxlF_1 | BG845_01322 | BG845_01323 | ABC-2 family transporter protein. | Putative ABC transporter ATP-binding protein YxlF. | 0.896 |
bioM | potA_4 | BG845_06263 | BG845_06523 | Biotin transport ATP-binding protein BioM. | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.490 |
bioM | yxlF_1 | BG845_06263 | BG845_01323 | Biotin transport ATP-binding protein BioM. | Putative ABC transporter ATP-binding protein YxlF. | 0.775 |
potA_4 | bioM | BG845_06523 | BG845_06263 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Biotin transport ATP-binding protein BioM. | 0.490 |
potA_4 | yxlF_1 | BG845_06523 | BG845_01323 | Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | Putative ABC transporter ATP-binding protein YxlF. | 0.617 |
tauB_2 | yxlF_1 | BG845_05778 | BG845_01323 | Taurine import ATP-binding protein TauB. | Putative ABC transporter ATP-binding protein YxlF. | 0.872 |
yheI_2 | yxlF_1 | BG845_02681 | BG845_01323 | Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. | Putative ABC transporter ATP-binding protein YxlF. | 0.609 |
yheI_3 | OSY37409.1 | BG845_04711 | BG845_04712 | Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. | Putative ABC transporter ATP-binding protein. | 0.841 |
yheI_3 | yxlF_1 | BG845_04711 | BG845_01323 | Putative multidrug resistance ABC transporter ATP-binding/permease protein YheI. | Putative ABC transporter ATP-binding protein YxlF. | 0.680 |
yxlF_1 | OSY37409.1 | BG845_01323 | BG845_04712 | Putative ABC transporter ATP-binding protein YxlF. | Putative ABC transporter ATP-binding protein. | 0.710 |
yxlF_1 | OSY38257.1 | BG845_01323 | BG845_04210 | Putative ABC transporter ATP-binding protein YxlF. | ABC-2 family transporter protein. | 0.762 |
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