Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY42494.1 | narK | BG845_01414 | BG845_01406 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Nitrate/nitrite transporter NarK. | 0.889 |
OSY42494.1 | nasC | BG845_01414 | BG845_01407 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.733 |
OSY42494.1 | nasD_1 | BG845_01414 | BG845_01411 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Nitrite reductase [NAD(P)H]. | 0.809 |
OSY42494.1 | nasD_2 | BG845_01414 | BG845_01412 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.924 |
OSY42494.1 | nirD | BG845_01414 | BG845_01413 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Nitrite reductase (NADH) small subunit. | 0.908 |
glnA_1 | glnA_2 | BG845_01971 | BG845_04756 | Glutamine synthetase. | Glutamine synthetase. | 0.935 |
glnA_1 | glnA_3 | BG845_01971 | BG845_05186 | Glutamine synthetase. | Putative glutamine synthetase 2. | 0.924 |
glnA_1 | glnT_1 | BG845_01971 | BG845_04541 | Glutamine synthetase. | Glutamine synthetase 3. | 0.927 |
glnA_1 | glnT_2 | BG845_01971 | BG845_04547 | Glutamine synthetase. | Glutamine synthetase 3. | 0.928 |
glnA_1 | nasD_2 | BG845_01971 | BG845_01412 | Glutamine synthetase. | Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.941 |
glnA_1 | nirD | BG845_01971 | BG845_01413 | Glutamine synthetase. | Nitrite reductase (NADH) small subunit. | 0.905 |
glnA_2 | glnA_1 | BG845_04756 | BG845_01971 | Glutamine synthetase. | Glutamine synthetase. | 0.935 |
glnA_2 | glnA_3 | BG845_04756 | BG845_05186 | Glutamine synthetase. | Putative glutamine synthetase 2. | 0.926 |
glnA_2 | glnT_1 | BG845_04756 | BG845_04541 | Glutamine synthetase. | Glutamine synthetase 3. | 0.931 |
glnA_2 | glnT_2 | BG845_04756 | BG845_04547 | Glutamine synthetase. | Glutamine synthetase 3. | 0.929 |
glnA_2 | narK | BG845_04756 | BG845_01406 | Glutamine synthetase. | Nitrate/nitrite transporter NarK. | 0.423 |
glnA_2 | nasD_2 | BG845_04756 | BG845_01412 | Glutamine synthetase. | Nitrite reductase [NAD(P)H]; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.964 |
glnA_2 | nirD | BG845_04756 | BG845_01413 | Glutamine synthetase. | Nitrite reductase (NADH) small subunit. | 0.939 |
glnA_3 | glnA_1 | BG845_05186 | BG845_01971 | Putative glutamine synthetase 2. | Glutamine synthetase. | 0.924 |
glnA_3 | glnA_2 | BG845_05186 | BG845_04756 | Putative glutamine synthetase 2. | Glutamine synthetase. | 0.926 |
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