Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
fas2 | fas3 | BG845_01430 | BG845_01431 | Ferredoxin fas2. | Putative 33.6 kDa protein in fasciation locus precursor. | 0.997 |
fas2 | fba | BG845_01430 | BG845_04375 | Ferredoxin fas2. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.912 |
fas2 | gapA_1 | BG845_01430 | BG845_03683 | Ferredoxin fas2. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.910 |
fas2 | gapA_2 | BG845_01430 | BG845_06834 | Ferredoxin fas2. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.910 |
fas2 | rpe_1 | BG845_01430 | BG845_03695 | Ferredoxin fas2. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.969 |
fas2 | rpe_2 | BG845_01430 | BG845_06659 | Ferredoxin fas2. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.963 |
fas2 | rpiB_1 | BG845_01430 | BG845_00652 | Ferredoxin fas2. | Ribose-5-phosphate isomerase B. | 0.923 |
fas2 | rpiB_2 | BG845_01430 | BG845_03372 | Ferredoxin fas2. | Ribose-5-phosphate isomerase B. | 0.923 |
fas2 | tal | BG845_01430 | BG845_03666 | Ferredoxin fas2. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.928 |
fas2 | tktB | BG845_01430 | BG845_06528 | Ferredoxin fas2. | Transketolase 2. | 0.709 |
fas3 | fas2 | BG845_01431 | BG845_01430 | Putative 33.6 kDa protein in fasciation locus precursor. | Ferredoxin fas2. | 0.997 |
fas3 | fba | BG845_01431 | BG845_04375 | Putative 33.6 kDa protein in fasciation locus precursor. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family. | 0.911 |
fas3 | gapA_1 | BG845_01431 | BG845_03683 | Putative 33.6 kDa protein in fasciation locus precursor. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.910 |
fas3 | gapA_2 | BG845_01431 | BG845_06834 | Putative 33.6 kDa protein in fasciation locus precursor. | Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.910 |
fas3 | rpe_1 | BG845_01431 | BG845_03695 | Putative 33.6 kDa protein in fasciation locus precursor. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.931 |
fas3 | rpe_2 | BG845_01431 | BG845_06659 | Putative 33.6 kDa protein in fasciation locus precursor. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.935 |
fas3 | rpiB_1 | BG845_01431 | BG845_00652 | Putative 33.6 kDa protein in fasciation locus precursor. | Ribose-5-phosphate isomerase B. | 0.914 |
fas3 | rpiB_2 | BG845_01431 | BG845_03372 | Putative 33.6 kDa protein in fasciation locus precursor. | Ribose-5-phosphate isomerase B. | 0.914 |
fas3 | tal | BG845_01431 | BG845_03666 | Putative 33.6 kDa protein in fasciation locus precursor. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily. | 0.925 |
fas3 | tktB | BG845_01431 | BG845_06528 | Putative 33.6 kDa protein in fasciation locus precursor. | Transketolase 2. | 0.982 |
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