Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36376.1 | OSY42533.1 | BG845_05453 | BG845_01453 | DoxX. | Hypothetical protein. | 0.410 |
OSY36376.1 | comM | BG845_05453 | BG845_02123 | DoxX. | Competence protein ComM. | 0.429 |
OSY42304.1 | OSY42531.1 | BG845_01223 | BG845_01451 | Hypothetical protein. | Hypothetical protein. | 0.669 |
OSY42304.1 | OSY42533.1 | BG845_01223 | BG845_01453 | Hypothetical protein. | Hypothetical protein. | 0.407 |
OSY42531.1 | OSY42304.1 | BG845_01451 | BG845_01223 | Hypothetical protein. | Hypothetical protein. | 0.669 |
OSY42531.1 | OSY42532.1 | BG845_01451 | BG845_01452 | Hypothetical protein. | DNA-binding ATP-dependent protease La. | 0.762 |
OSY42531.1 | OSY42533.1 | BG845_01451 | BG845_01453 | Hypothetical protein. | Hypothetical protein. | 0.628 |
OSY42532.1 | OSY42531.1 | BG845_01452 | BG845_01451 | DNA-binding ATP-dependent protease La. | Hypothetical protein. | 0.762 |
OSY42532.1 | OSY42533.1 | BG845_01452 | BG845_01453 | DNA-binding ATP-dependent protease La. | Hypothetical protein. | 0.622 |
OSY42533.1 | OSY36376.1 | BG845_01453 | BG845_05453 | Hypothetical protein. | DoxX. | 0.410 |
OSY42533.1 | OSY42304.1 | BG845_01453 | BG845_01223 | Hypothetical protein. | Hypothetical protein. | 0.407 |
OSY42533.1 | OSY42531.1 | BG845_01453 | BG845_01451 | Hypothetical protein. | Hypothetical protein. | 0.628 |
OSY42533.1 | OSY42532.1 | BG845_01453 | BG845_01452 | Hypothetical protein. | DNA-binding ATP-dependent protease La. | 0.622 |
OSY42533.1 | comM | BG845_01453 | BG845_02123 | Hypothetical protein. | Competence protein ComM. | 0.410 |
comM | OSY36376.1 | BG845_02123 | BG845_05453 | Competence protein ComM. | DoxX. | 0.429 |
comM | OSY42533.1 | BG845_02123 | BG845_01453 | Competence protein ComM. | Hypothetical protein. | 0.410 |