Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY42034.1 | prkC_2 | BG845_01530 | BG845_01531 | Carboxylesterase BioH. | Serine/threonine-protein kinase PrkC. | 0.456 |
OSY42036.1 | prkC_2 | BG845_01532 | BG845_01531 | Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG). | Serine/threonine-protein kinase PrkC. | 0.488 |
fhaA | fhaB | BG845_03919 | BG845_03918 | FHA domain-containing protein FhaA. | FHA domain-containing protein FhaB. | 0.974 |
fhaA | pknB_1 | BG845_03919 | BG845_03913 | FHA domain-containing protein FhaA. | Serine/threonine-protein kinase PknB. | 0.945 |
fhaA | prkC_2 | BG845_03919 | BG845_01531 | FHA domain-containing protein FhaA. | Serine/threonine-protein kinase PrkC. | 0.577 |
fhaA | pstP_1 | BG845_03919 | BG845_03472 | FHA domain-containing protein FhaA. | PP2C-family Ser/Thr phosphatase. | 0.547 |
fhaA | pstP_2 | BG845_03919 | BG845_03917 | FHA domain-containing protein FhaA. | PP2C-family Ser/Thr phosphatase. | 0.740 |
fhaA | spk1 | BG845_03919 | BG845_04812 | FHA domain-containing protein FhaA. | Serine/threonine-protein kinase PK-1. | 0.929 |
fhaB | fhaA | BG845_03918 | BG845_03919 | FHA domain-containing protein FhaB. | FHA domain-containing protein FhaA. | 0.974 |
fhaB | pknB_1 | BG845_03918 | BG845_03913 | FHA domain-containing protein FhaB. | Serine/threonine-protein kinase PknB. | 0.960 |
fhaB | prkC_2 | BG845_03918 | BG845_01531 | FHA domain-containing protein FhaB. | Serine/threonine-protein kinase PrkC. | 0.588 |
fhaB | pstP_1 | BG845_03918 | BG845_03472 | FHA domain-containing protein FhaB. | PP2C-family Ser/Thr phosphatase. | 0.649 |
fhaB | pstP_2 | BG845_03918 | BG845_03917 | FHA domain-containing protein FhaB. | PP2C-family Ser/Thr phosphatase. | 0.845 |
fhaB | spk1 | BG845_03918 | BG845_04812 | FHA domain-containing protein FhaB. | Serine/threonine-protein kinase PK-1. | 0.933 |
garA | pknB_1 | BG845_00709 | BG845_03913 | Glycogen accumulation regulator GarA. | Serine/threonine-protein kinase PknB. | 0.982 |
garA | prkC_2 | BG845_00709 | BG845_01531 | Glycogen accumulation regulator GarA. | Serine/threonine-protein kinase PrkC. | 0.905 |
garA | pstP_1 | BG845_00709 | BG845_03472 | Glycogen accumulation regulator GarA. | PP2C-family Ser/Thr phosphatase. | 0.714 |
garA | pstP_2 | BG845_00709 | BG845_03917 | Glycogen accumulation regulator GarA. | PP2C-family Ser/Thr phosphatase. | 0.773 |
garA | spk1 | BG845_00709 | BG845_04812 | Glycogen accumulation regulator GarA. | Serine/threonine-protein kinase PK-1. | 0.979 |
pknB_1 | fhaA | BG845_03913 | BG845_03919 | Serine/threonine-protein kinase PknB. | FHA domain-containing protein FhaA. | 0.945 |
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