Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35280.1 | eccCa1_1 | BG845_06146 | BG845_01679 | Hypothetical protein. | ESX-1 secretion system protein EccCa1. | 0.659 |
OSY36018.1 | OSY42183.1 | BG845_05700 | BG845_01681 | Hypothetical protein. | Hypothetical protein. | 0.625 |
OSY36018.1 | eccCa1_1 | BG845_05700 | BG845_01679 | Hypothetical protein. | ESX-1 secretion system protein EccCa1. | 0.652 |
OSY38702.1 | eccCa1_1 | BG845_03904 | BG845_01679 | Acetyltransferase (GNAT) family protein. | ESX-1 secretion system protein EccCa1. | 0.652 |
OSY41020.1 | OSY41035.1 | BG845_02362 | BG845_02377 | Hypothetical protein. | Proteins of 100 residues with WXG; Belongs to the WXG100 family. | 0.596 |
OSY41020.1 | eccCa1_1 | BG845_02362 | BG845_01679 | Hypothetical protein. | ESX-1 secretion system protein EccCa1. | 0.811 |
OSY41035.1 | OSY41020.1 | BG845_02377 | BG845_02362 | Proteins of 100 residues with WXG; Belongs to the WXG100 family. | Hypothetical protein. | 0.596 |
OSY41035.1 | eccCa1_1 | BG845_02377 | BG845_01679 | Proteins of 100 residues with WXG; Belongs to the WXG100 family. | ESX-1 secretion system protein EccCa1. | 0.836 |
OSY42178.1 | OSY42179.1 | BG845_01676 | BG845_01677 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY42178.1 | OSY42180.1 | BG845_01676 | BG845_01678 | Hypothetical protein. | Hypothetical protein. | 0.686 |
OSY42178.1 | OSY42182.1 | BG845_01676 | BG845_01680 | Hypothetical protein. | Hypothetical protein. | 0.401 |
OSY42178.1 | OSY42183.1 | BG845_01676 | BG845_01681 | Hypothetical protein. | Hypothetical protein. | 0.401 |
OSY42178.1 | eccCa1_1 | BG845_01676 | BG845_01679 | Hypothetical protein. | ESX-1 secretion system protein EccCa1. | 0.686 |
OSY42179.1 | OSY42178.1 | BG845_01677 | BG845_01676 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY42179.1 | OSY42180.1 | BG845_01677 | BG845_01678 | Hypothetical protein. | Hypothetical protein. | 0.687 |
OSY42179.1 | OSY42182.1 | BG845_01677 | BG845_01680 | Hypothetical protein. | Hypothetical protein. | 0.401 |
OSY42179.1 | OSY42183.1 | BG845_01677 | BG845_01681 | Hypothetical protein. | Hypothetical protein. | 0.401 |
OSY42179.1 | eccCa1_1 | BG845_01677 | BG845_01679 | Hypothetical protein. | ESX-1 secretion system protein EccCa1. | 0.690 |
OSY42180.1 | OSY42178.1 | BG845_01678 | BG845_01676 | Hypothetical protein. | Hypothetical protein. | 0.686 |
OSY42180.1 | OSY42179.1 | BG845_01678 | BG845_01677 | Hypothetical protein. | Hypothetical protein. | 0.687 |
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