Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
adhB | adhE | BG845_01712 | BG845_06517 | Alcohol dehydrogenase 2. | Aldehyde-alcohol dehydrogenase. | 0.969 |
adhB | bicA | BG845_01712 | BG845_00270 | Alcohol dehydrogenase 2. | Bicarbonate transporter BicA. | 0.598 |
adhB | glnA_1 | BG845_01712 | BG845_01971 | Alcohol dehydrogenase 2. | Glutamine synthetase. | 0.633 |
adhB | glnA_2 | BG845_01712 | BG845_04756 | Alcohol dehydrogenase 2. | Glutamine synthetase. | 0.633 |
adhB | glnA_3 | BG845_01712 | BG845_05186 | Alcohol dehydrogenase 2. | Putative glutamine synthetase 2. | 0.633 |
adhB | glnT_1 | BG845_01712 | BG845_04541 | Alcohol dehydrogenase 2. | Glutamine synthetase 3. | 0.633 |
adhB | glnT_2 | BG845_01712 | BG845_04547 | Alcohol dehydrogenase 2. | Glutamine synthetase 3. | 0.633 |
adhB | ndh | BG845_01712 | BG845_03116 | Alcohol dehydrogenase 2. | NADH dehydrogenase. | 0.638 |
adhB | yhdG_1 | BG845_01712 | BG845_00663 | Alcohol dehydrogenase 2. | Putative amino acid permease YhdG. | 0.732 |
adhB | yitF | BG845_01712 | BG845_01713 | Alcohol dehydrogenase 2. | Putative isomerase YitF; Belongs to the mandelate racemase/muconate lactonizing enzyme family. | 0.780 |
adhE | adhB | BG845_06517 | BG845_01712 | Aldehyde-alcohol dehydrogenase. | Alcohol dehydrogenase 2. | 0.969 |
bicA | adhB | BG845_00270 | BG845_01712 | Bicarbonate transporter BicA. | Alcohol dehydrogenase 2. | 0.598 |
bicA | glnA_1 | BG845_00270 | BG845_01971 | Bicarbonate transporter BicA. | Glutamine synthetase. | 0.638 |
bicA | glnA_2 | BG845_00270 | BG845_04756 | Bicarbonate transporter BicA. | Glutamine synthetase. | 0.638 |
bicA | glnA_3 | BG845_00270 | BG845_05186 | Bicarbonate transporter BicA. | Putative glutamine synthetase 2. | 0.638 |
bicA | glnT_1 | BG845_00270 | BG845_04541 | Bicarbonate transporter BicA. | Glutamine synthetase 3. | 0.638 |
bicA | glnT_2 | BG845_00270 | BG845_04547 | Bicarbonate transporter BicA. | Glutamine synthetase 3. | 0.638 |
bicA | ndh | BG845_00270 | BG845_03116 | Bicarbonate transporter BicA. | NADH dehydrogenase. | 0.667 |
glnA_1 | adhB | BG845_01971 | BG845_01712 | Glutamine synthetase. | Alcohol dehydrogenase 2. | 0.633 |
glnA_1 | bicA | BG845_01971 | BG845_00270 | Glutamine synthetase. | Bicarbonate transporter BicA. | 0.638 |
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