STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY41702.1Hypothetical protein. (201 aa)    
Predicted Functional Partners:
tqsA
AI-2 transport protein TqsA.
       0.700
OSY41199.1
Hypothetical protein.
 
    0.432
tmoS
Sensor histidine kinase TmoS.
  
  
 0.431
ddc_1
L-2,4-diaminobutyrate decarboxylase.
  
  
 0.425
gadB
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
  
 0.425
ddc_2
L-2,4-diaminobutyrate decarboxylase.
  
  
 0.425
OSY43460.1
Hypothetical protein.
      
 0.424
OSY41727.1
YibE/F-like protein.
      
 0.424
nuoK-2
NADH-quinone oxidoreductase subunit 11; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.
     
 0.415
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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