Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36463.1 | OSY41727.1 | BG845_05385 | BG845_01755 | VanW like protein. | YibE/F-like protein. | 0.566 |
OSY41702.1 | OSY41727.1 | BG845_01730 | BG845_01755 | Hypothetical protein. | YibE/F-like protein. | 0.424 |
OSY41702.1 | OSY43460.1 | BG845_01730 | BG845_00403 | Hypothetical protein. | Hypothetical protein. | 0.424 |
OSY41725.1 | OSY41726.1 | BG845_01753 | BG845_01754 | Radical SAM superfamily protein. | Hypothetical protein. | 0.536 |
OSY41725.1 | OSY41727.1 | BG845_01753 | BG845_01755 | Radical SAM superfamily protein. | YibE/F-like protein. | 0.548 |
OSY41725.1 | aspS | BG845_01753 | BG845_01752 | Radical SAM superfamily protein. | Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.613 |
OSY41726.1 | OSY41725.1 | BG845_01754 | BG845_01753 | Hypothetical protein. | Radical SAM superfamily protein. | 0.536 |
OSY41726.1 | OSY41727.1 | BG845_01754 | BG845_01755 | Hypothetical protein. | YibE/F-like protein. | 0.773 |
OSY41726.1 | aspS | BG845_01754 | BG845_01752 | Hypothetical protein. | Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.486 |
OSY41727.1 | OSY36463.1 | BG845_01755 | BG845_05385 | YibE/F-like protein. | VanW like protein. | 0.566 |
OSY41727.1 | OSY41702.1 | BG845_01755 | BG845_01730 | YibE/F-like protein. | Hypothetical protein. | 0.424 |
OSY41727.1 | OSY41725.1 | BG845_01755 | BG845_01753 | YibE/F-like protein. | Radical SAM superfamily protein. | 0.548 |
OSY41727.1 | OSY41726.1 | BG845_01755 | BG845_01754 | YibE/F-like protein. | Hypothetical protein. | 0.773 |
OSY41727.1 | OSY43460.1 | BG845_01755 | BG845_00403 | YibE/F-like protein. | Hypothetical protein. | 0.424 |
OSY41727.1 | OSY44136.1 | BG845_01755 | BG845_00257 | YibE/F-like protein. | MarR family protein. | 0.407 |
OSY41727.1 | aspS | BG845_01755 | BG845_01752 | YibE/F-like protein. | Aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily. | 0.410 |
OSY41727.1 | dus | BG845_01755 | BG845_03330 | YibE/F-like protein. | Putative tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.450 |
OSY43460.1 | OSY41702.1 | BG845_00403 | BG845_01730 | Hypothetical protein. | Hypothetical protein. | 0.424 |
OSY43460.1 | OSY41727.1 | BG845_00403 | BG845_01755 | Hypothetical protein. | YibE/F-like protein. | 0.424 |
OSY44136.1 | OSY41727.1 | BG845_00257 | BG845_01755 | MarR family protein. | YibE/F-like protein. | 0.407 |
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