Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY35909.1 | OSY41782.1 | BG845_05747 | BG845_01810 | MarR family protein. | Hypothetical protein. | 0.433 |
OSY41330.1 | OSY41782.1 | BG845_02232 | BG845_01810 | Hypothetical protein. | Hypothetical protein. | 0.498 |
OSY41777.1 | OSY41780.1 | BG845_01805 | BG845_01808 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Transcriptional activator FtrA. | 0.450 |
OSY41777.1 | OSY41781.1 | BG845_01805 | BG845_01809 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Glyoxalase-like domain protein. | 0.465 |
OSY41777.1 | OSY41782.1 | BG845_01805 | BG845_01810 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.428 |
OSY41777.1 | argO | BG845_01805 | BG845_01806 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | Arginine exporter protein ArgO. | 0.964 |
OSY41777.1 | tipA_2 | BG845_01805 | BG845_01807 | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | HTH-type transcriptional activator TipA. | 0.458 |
OSY41780.1 | OSY41777.1 | BG845_01808 | BG845_01805 | Transcriptional activator FtrA. | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.450 |
OSY41780.1 | OSY41781.1 | BG845_01808 | BG845_01809 | Transcriptional activator FtrA. | Glyoxalase-like domain protein. | 0.932 |
OSY41780.1 | OSY41782.1 | BG845_01808 | BG845_01810 | Transcriptional activator FtrA. | Hypothetical protein. | 0.818 |
OSY41780.1 | argO | BG845_01808 | BG845_01806 | Transcriptional activator FtrA. | Arginine exporter protein ArgO. | 0.595 |
OSY41780.1 | tipA_2 | BG845_01808 | BG845_01807 | Transcriptional activator FtrA. | HTH-type transcriptional activator TipA. | 0.727 |
OSY41781.1 | OSY41777.1 | BG845_01809 | BG845_01805 | Glyoxalase-like domain protein. | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.465 |
OSY41781.1 | OSY41780.1 | BG845_01809 | BG845_01808 | Glyoxalase-like domain protein. | Transcriptional activator FtrA. | 0.932 |
OSY41781.1 | OSY41782.1 | BG845_01809 | BG845_01810 | Glyoxalase-like domain protein. | Hypothetical protein. | 0.780 |
OSY41781.1 | argO | BG845_01809 | BG845_01806 | Glyoxalase-like domain protein. | Arginine exporter protein ArgO. | 0.585 |
OSY41781.1 | tipA_2 | BG845_01809 | BG845_01807 | Glyoxalase-like domain protein. | HTH-type transcriptional activator TipA. | 0.728 |
OSY41782.1 | OSY35909.1 | BG845_01810 | BG845_05747 | Hypothetical protein. | MarR family protein. | 0.433 |
OSY41782.1 | OSY41330.1 | BG845_01810 | BG845_02232 | Hypothetical protein. | Hypothetical protein. | 0.498 |
OSY41782.1 | OSY41777.1 | BG845_01810 | BG845_01805 | Hypothetical protein. | Putative HTH-type transcriptional regulator/MT2039; Belongs to the LysR transcriptional regulatory family. | 0.428 |
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