STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY41872.1Hypothetical protein. (282 aa)    
Predicted Functional Partners:
OSY39585.1
Hypothetical protein.
  
   
 0.613
OSY35985.1
Hypothetical protein.
  
     0.588
eccCa1_3
ESX-1 secretion system protein EccCa1.
 
   
 0.570
OSY35001.1
55.5 kDa and 49.5 kDa sporulation proteins.
  
     0.562
OSY41871.1
Hypothetical protein.
       0.538
OSY42775.1
Hypothetical protein.
  
     0.515
OSY39499.1
Helix-turn-helix domain protein.
  
     0.511
tmk_2
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
  
    0.502
OSY41190.1
Hypothetical protein.
  
     0.496
OSY41722.1
Hypothetical protein.
  
     0.470
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.