STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY41464.1Hypothetical protein. (570 aa)    
Predicted Functional Partners:
OSY41465.1
Hypothetical protein.
  
 0.954
OSY41462.1
Undecaprenyl-phosphate mannosyltransferase.
 
     0.862
OSY34526.1
Hypothetical protein.
  
 0.803
OSY36486.1
Putative glycosyl transferase.
 
  
 0.781
OSY41463.1
Hypothetical protein.
       0.773
OSY41466.1
Hypothetical protein.
       0.773
OSY38325.1
Hypothetical protein.
  
     0.772
OSY34524.1
Glycosyl transferase family 2.
 
  
 0.771
OSY35338.1
Hypothetical protein.
 
     0.753
OSY36485.1
Undecaprenyl-phosphate mannosyltransferase.
 
     0.733
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.