Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY34540.1 | OSY41206.1 | BG845_06756 | BG845_02108 | Saccharopine dehydrogenase. | Hypothetical protein. | 0.634 |
OSY35283.1 | OSY41206.1 | BG845_06149 | BG845_02108 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.534 |
OSY38955.1 | OSY40540.1 | BG845_03827 | BG845_02615 | Glucans biosynthesis protein. | Putative phosphatase. | 0.562 |
OSY38955.1 | OSY41206.1 | BG845_03827 | BG845_02108 | Glucans biosynthesis protein. | Hypothetical protein. | 0.556 |
OSY38955.1 | OSY41209.1 | BG845_03827 | BG845_02111 | Glucans biosynthesis protein. | CAAX amino terminal protease self- immunity. | 0.591 |
OSY40540.1 | OSY38955.1 | BG845_02615 | BG845_03827 | Putative phosphatase. | Glucans biosynthesis protein. | 0.562 |
OSY40540.1 | OSY41206.1 | BG845_02615 | BG845_02108 | Putative phosphatase. | Hypothetical protein. | 0.619 |
OSY41206.1 | OSY34540.1 | BG845_02108 | BG845_06756 | Hypothetical protein. | Saccharopine dehydrogenase. | 0.634 |
OSY41206.1 | OSY35283.1 | BG845_02108 | BG845_06149 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.534 |
OSY41206.1 | OSY38955.1 | BG845_02108 | BG845_03827 | Hypothetical protein. | Glucans biosynthesis protein. | 0.556 |
OSY41206.1 | OSY40540.1 | BG845_02108 | BG845_02615 | Hypothetical protein. | Putative phosphatase. | 0.619 |
OSY41206.1 | OSY41208.1 | BG845_02108 | BG845_02110 | Hypothetical protein. | Hypothetical protein. | 0.724 |
OSY41206.1 | OSY41209.1 | BG845_02108 | BG845_02111 | Hypothetical protein. | CAAX amino terminal protease self- immunity. | 0.756 |
OSY41206.1 | OSY41721.1 | BG845_02108 | BG845_01749 | Hypothetical protein. | S-adenosyl methyltransferase. | 0.559 |
OSY41206.1 | OSY43615.1 | BG845_02108 | BG845_00558 | Hypothetical protein. | ABC-2 family transporter protein. | 0.525 |
OSY41206.1 | ffh | BG845_02108 | BG845_02109 | Hypothetical protein. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.770 |
OSY41206.1 | otsB | BG845_02108 | BG845_00021 | Hypothetical protein. | Trehalose-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. | 0.651 |
OSY41208.1 | OSY41206.1 | BG845_02110 | BG845_02108 | Hypothetical protein. | Hypothetical protein. | 0.724 |
OSY41208.1 | OSY41209.1 | BG845_02110 | BG845_02111 | Hypothetical protein. | CAAX amino terminal protease self- immunity. | 0.821 |
OSY41208.1 | ffh | BG845_02110 | BG845_02109 | Hypothetical protein. | Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.912 |
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