Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY41242.1 | OSY41243.1 | BG845_02144 | BG845_02145 | Hypothetical protein. | Hypothetical protein. | 0.686 |
OSY41242.1 | OSY41245.1 | BG845_02144 | BG845_02147 | Hypothetical protein. | Hypothetical protein. | 0.685 |
OSY41242.1 | OSY41248.1 | BG845_02144 | BG845_02150 | Hypothetical protein. | Hypothetical protein. | 0.495 |
OSY41242.1 | dxr | BG845_02144 | BG845_02148 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.495 |
OSY41242.1 | rip1 | BG845_02144 | BG845_02149 | Hypothetical protein. | Zinc metalloprotease Rip1. | 0.495 |
OSY41242.1 | ykoU_1 | BG845_02144 | BG845_02146 | Hypothetical protein. | Putative ATP-dependent DNA ligase YkoU. | 0.685 |
OSY41243.1 | OSY41242.1 | BG845_02145 | BG845_02144 | Hypothetical protein. | Hypothetical protein. | 0.686 |
OSY41243.1 | OSY41245.1 | BG845_02145 | BG845_02147 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY41243.1 | OSY41248.1 | BG845_02145 | BG845_02150 | Hypothetical protein. | Hypothetical protein. | 0.552 |
OSY41243.1 | dxr | BG845_02145 | BG845_02148 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.552 |
OSY41243.1 | rip1 | BG845_02145 | BG845_02149 | Hypothetical protein. | Zinc metalloprotease Rip1. | 0.552 |
OSY41243.1 | ykoU_1 | BG845_02145 | BG845_02146 | Hypothetical protein. | Putative ATP-dependent DNA ligase YkoU. | 0.773 |
OSY41245.1 | OSY41242.1 | BG845_02147 | BG845_02144 | Hypothetical protein. | Hypothetical protein. | 0.685 |
OSY41245.1 | OSY41243.1 | BG845_02147 | BG845_02145 | Hypothetical protein. | Hypothetical protein. | 0.773 |
OSY41245.1 | OSY41248.1 | BG845_02147 | BG845_02150 | Hypothetical protein. | Hypothetical protein. | 0.552 |
OSY41245.1 | dxr | BG845_02147 | BG845_02148 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.670 |
OSY41245.1 | rip1 | BG845_02147 | BG845_02149 | Hypothetical protein. | Zinc metalloprotease Rip1. | 0.670 |
OSY41245.1 | ykoU_1 | BG845_02147 | BG845_02146 | Hypothetical protein. | Putative ATP-dependent DNA ligase YkoU. | 0.773 |
OSY41248.1 | OSY41242.1 | BG845_02150 | BG845_02144 | Hypothetical protein. | Hypothetical protein. | 0.495 |
OSY41248.1 | OSY41243.1 | BG845_02150 | BG845_02145 | Hypothetical protein. | Hypothetical protein. | 0.552 |
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