STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY41268.1Putative oxidoreductase. (299 aa)    
Predicted Functional Partners:
fabG_13
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
  
0.763
OSY41270.1
Bacterial regulatory proteins, tetR family.
 
     0.570
rocA
1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.555
lcfB_16
Long-chain-fatty-acid--CoA ligase.
  
  
 0.503
OSY43590.1
SnoaL-like polyketide cyclase.
  
     0.499
lvr_1
Levodione reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.450
OSY36974.1
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase.
 
  
 0.436
butA
Diacetyl reductase [(S)-acetoin forming].
 
     0.419
OSY35343.1
GDSL-like Lipase/Acylhydrolase.
  
     0.404
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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