Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ftsW_2 | ftsX | BG845_04837 | BG845_01471 | Lipid II flippase FtsW; Belongs to the SEDS family. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.598 |
ftsW_2 | mepM_2 | BG845_04837 | BG845_02422 | Lipid II flippase FtsW; Belongs to the SEDS family. | Murein DD-endopeptidase MepM. | 0.543 |
ftsW_2 | mltG | BG845_04837 | BG845_01737 | Lipid II flippase FtsW; Belongs to the SEDS family. | Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.610 |
ftsW_2 | murC | BG845_04837 | BG845_04841 | Lipid II flippase FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.927 |
ftsW_2 | pbpF | BG845_04837 | BG845_06485 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1F. | 0.801 |
ftsW_2 | ponA1_1 | BG845_04837 | BG845_01803 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1A. | 0.764 |
ftsW_2 | ponA1_2 | BG845_04837 | BG845_04350 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1A. | 0.826 |
ftsW_2 | ponA1_3 | BG845_04837 | BG845_04886 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1A. | 0.758 |
ftsW_3 | ftsX | BG845_06180 | BG845_01471 | Lipid II flippase FtsW; Belongs to the SEDS family. | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.592 |
ftsW_3 | mepM_2 | BG845_06180 | BG845_02422 | Lipid II flippase FtsW; Belongs to the SEDS family. | Murein DD-endopeptidase MepM. | 0.545 |
ftsW_3 | mltG | BG845_06180 | BG845_01737 | Lipid II flippase FtsW; Belongs to the SEDS family. | Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.578 |
ftsW_3 | murC | BG845_06180 | BG845_04841 | Lipid II flippase FtsW; Belongs to the SEDS family. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.930 |
ftsW_3 | pbpF | BG845_06180 | BG845_06485 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1F. | 0.791 |
ftsW_3 | ponA1_1 | BG845_06180 | BG845_01803 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1A. | 0.769 |
ftsW_3 | ponA1_2 | BG845_06180 | BG845_04350 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1A. | 0.807 |
ftsW_3 | ponA1_3 | BG845_06180 | BG845_04886 | Lipid II flippase FtsW; Belongs to the SEDS family. | Penicillin-binding protein 1A. | 0.760 |
ftsX | ftsW_2 | BG845_01471 | BG845_04837 | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Lipid II flippase FtsW; Belongs to the SEDS family. | 0.598 |
ftsX | ftsW_3 | BG845_01471 | BG845_06180 | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Lipid II flippase FtsW; Belongs to the SEDS family. | 0.592 |
ftsX | lepB | BG845_01471 | BG845_02119 | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Signal peptidase I; Belongs to the peptidase S26 family. | 0.474 |
ftsX | mepM_2 | BG845_01471 | BG845_02422 | Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | Murein DD-endopeptidase MepM. | 0.480 |
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