Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY41098.1 | exoA | BG845_02440 | BG845_02441 | Hypothetical protein. | Exodeoxyribonuclease. | 0.634 |
OSY41098.1 | icd_1 | BG845_02440 | BG845_02439 | Hypothetical protein. | Isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family. | 0.458 |
OSY41098.1 | mqnE | BG845_02440 | BG845_02444 | Hypothetical protein. | Aminodeoxyfutalosine synthase. | 0.446 |
OSY41098.1 | pknA_2 | BG845_02440 | BG845_02442 | Hypothetical protein. | Serine/threonine-protein kinase PknA. | 0.634 |
OSY41098.1 | proS_2 | BG845_02440 | BG845_02443 | Hypothetical protein. | Proline--tRNA ligase. | 0.548 |
exoA | OSY41098.1 | BG845_02441 | BG845_02440 | Exodeoxyribonuclease. | Hypothetical protein. | 0.634 |
exoA | icd_1 | BG845_02441 | BG845_02439 | Exodeoxyribonuclease. | Isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family. | 0.623 |
exoA | mqnE | BG845_02441 | BG845_02444 | Exodeoxyribonuclease. | Aminodeoxyfutalosine synthase. | 0.574 |
exoA | pknA_2 | BG845_02441 | BG845_02442 | Exodeoxyribonuclease. | Serine/threonine-protein kinase PknA. | 0.779 |
exoA | proS_2 | BG845_02441 | BG845_02443 | Exodeoxyribonuclease. | Proline--tRNA ligase. | 0.675 |
icd_1 | OSY41098.1 | BG845_02439 | BG845_02440 | Isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family. | Hypothetical protein. | 0.458 |
icd_1 | exoA | BG845_02439 | BG845_02441 | Isocitrate dehydrogenase [NADP]; Belongs to the monomeric-type IDH family. | Exodeoxyribonuclease. | 0.623 |
mqnE | OSY41098.1 | BG845_02444 | BG845_02440 | Aminodeoxyfutalosine synthase. | Hypothetical protein. | 0.446 |
mqnE | exoA | BG845_02444 | BG845_02441 | Aminodeoxyfutalosine synthase. | Exodeoxyribonuclease. | 0.574 |
mqnE | pknA_2 | BG845_02444 | BG845_02442 | Aminodeoxyfutalosine synthase. | Serine/threonine-protein kinase PknA. | 0.536 |
mqnE | proS_2 | BG845_02444 | BG845_02443 | Aminodeoxyfutalosine synthase. | Proline--tRNA ligase. | 0.679 |
pknA_2 | OSY41098.1 | BG845_02442 | BG845_02440 | Serine/threonine-protein kinase PknA. | Hypothetical protein. | 0.634 |
pknA_2 | exoA | BG845_02442 | BG845_02441 | Serine/threonine-protein kinase PknA. | Exodeoxyribonuclease. | 0.779 |
pknA_2 | mqnE | BG845_02442 | BG845_02444 | Serine/threonine-protein kinase PknA. | Aminodeoxyfutalosine synthase. | 0.536 |
pknA_2 | proS_2 | BG845_02442 | BG845_02443 | Serine/threonine-protein kinase PknA. | Proline--tRNA ligase. | 0.664 |
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