STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSY40708.1Putative HTH-type transcriptional regulator/MT0914. (920 aa)    
Predicted Functional Partners:
OSY43909.1
CGNR zinc finger.
  
     0.547
OSY39893.1
Hypothetical protein.
  
     0.516
OSY40704.1
Hypothetical protein.
 
     0.489
moaR1
Transcriptional regulatory protein MoaR1.
 
     0.465
OSY42159.1
Hypothetical protein.
  
     0.464
mhqD
Putative hydrolase MhqD.
       0.445
mhqO
Putative ring-cleaving dioxygenase MhqO.
       0.445
ptpA_2
Prolyl tripeptidyl peptidase precursor.
       0.432
OSY41054.1
Purine catabolism regulatory protein-like family protein.
 
     0.429
OSY43110.1
Bacterial transcriptional activator domain protein.
 
     0.417
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
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