Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY36566.1 | OSY40720.1 | BG845_05334 | BG845_02478 | Carboxymuconolactone decarboxylase family protein. | 4-oxalocrotonate tautomerase. | 0.510 |
OSY36566.1 | OSY43933.1 | BG845_05334 | BG845_00053 | Carboxymuconolactone decarboxylase family protein. | Carboxymuconolactone decarboxylase family protein. | 0.915 |
OSY36566.1 | nagI | BG845_05334 | BG845_05786 | Carboxymuconolactone decarboxylase family protein. | Gentisate 1,2-dioxygenase. | 0.451 |
OSY36566.1 | pcaB | BG845_05334 | BG845_06791 | Carboxymuconolactone decarboxylase family protein. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.989 |
OSY40720.1 | OSY36566.1 | BG845_02478 | BG845_05334 | 4-oxalocrotonate tautomerase. | Carboxymuconolactone decarboxylase family protein. | 0.510 |
OSY40720.1 | OSY43933.1 | BG845_02478 | BG845_00053 | 4-oxalocrotonate tautomerase. | Carboxymuconolactone decarboxylase family protein. | 0.512 |
OSY40720.1 | nagI | BG845_02478 | BG845_05786 | 4-oxalocrotonate tautomerase. | Gentisate 1,2-dioxygenase. | 0.567 |
OSY40720.1 | pcaB | BG845_02478 | BG845_06791 | 4-oxalocrotonate tautomerase. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.561 |
OSY40720.1 | yybR_1 | BG845_02478 | BG845_02479 | 4-oxalocrotonate tautomerase. | Putative HTH-type transcriptional regulator YybR. | 0.562 |
OSY43933.1 | OSY36566.1 | BG845_00053 | BG845_05334 | Carboxymuconolactone decarboxylase family protein. | Carboxymuconolactone decarboxylase family protein. | 0.915 |
OSY43933.1 | OSY40720.1 | BG845_00053 | BG845_02478 | Carboxymuconolactone decarboxylase family protein. | 4-oxalocrotonate tautomerase. | 0.512 |
OSY43933.1 | nagI | BG845_00053 | BG845_05786 | Carboxymuconolactone decarboxylase family protein. | Gentisate 1,2-dioxygenase. | 0.455 |
OSY43933.1 | pcaB | BG845_00053 | BG845_06791 | Carboxymuconolactone decarboxylase family protein. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.959 |
nagI | OSY36566.1 | BG845_05786 | BG845_05334 | Gentisate 1,2-dioxygenase. | Carboxymuconolactone decarboxylase family protein. | 0.451 |
nagI | OSY40720.1 | BG845_05786 | BG845_02478 | Gentisate 1,2-dioxygenase. | 4-oxalocrotonate tautomerase. | 0.567 |
nagI | OSY43933.1 | BG845_05786 | BG845_00053 | Gentisate 1,2-dioxygenase. | Carboxymuconolactone decarboxylase family protein. | 0.455 |
nagI | pcaB | BG845_05786 | BG845_06791 | Gentisate 1,2-dioxygenase. | 3-carboxy-cis,cis-muconate cycloisomerase. | 0.560 |
pcaB | OSY36566.1 | BG845_06791 | BG845_05334 | 3-carboxy-cis,cis-muconate cycloisomerase. | Carboxymuconolactone decarboxylase family protein. | 0.989 |
pcaB | OSY40720.1 | BG845_06791 | BG845_02478 | 3-carboxy-cis,cis-muconate cycloisomerase. | 4-oxalocrotonate tautomerase. | 0.561 |
pcaB | OSY43933.1 | BG845_06791 | BG845_00053 | 3-carboxy-cis,cis-muconate cycloisomerase. | Carboxymuconolactone decarboxylase family protein. | 0.959 |
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