STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dagKDiacylglycerol kinase. (316 aa)    
Predicted Functional Partners:
OSY41077.1
Intracellular chorismate mutase.
 
     0.609
OSY39120.1
Hypothetical protein.
 
   
 0.588
OSY39805.1
Hypothetical protein.
  
     0.587
OSY40562.1
Hypothetical protein.
       0.582
OSY39446.1
Hypothetical protein.
  
     0.528
OSY37309.1
Acetyltransferase (GNAT) family protein.
 
     0.524
OSY39401.1
Hypothetical protein.
  
     0.513
OSY40546.1
Hypothetical protein.
  
     0.497
OSY37298.1
3'-5' exoribonuclease; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.478
OSY41282.1
Hypothetical protein.
  
     0.471
Your Current Organism:
Pseudonocardia autotrophica
NCBI taxonomy Id: 2074
Other names: ATCC 19727, Amycolata autotrophica, CIP 107114, DSM 535, IFO 12743, IMSNU 20050, JCM 4348, NBRC 12743, NRRL B-11275, Nocardia autotrophica, P. autotrophica, Streptomyces autotrophicus, VKM Ac-941
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.