Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OSY40572.1 | gmr | BG845_02647 | BG845_02642 | MOSC domain protein. | Cyclic di-GMP phosphodiesterase Gmr. | 0.537 |
OSY40572.1 | opuBB_1 | BG845_02647 | BG845_02644 | MOSC domain protein. | Choline transport system permease protein OpuBB. | 0.773 |
OSY40572.1 | opuCA_2 | BG845_02647 | BG845_02643 | MOSC domain protein. | Carnitine transport ATP-binding protein OpuCA. | 0.762 |
OSY40572.1 | opuCB | BG845_02647 | BG845_02645 | MOSC domain protein. | Carnitine transport permease protein OpuCB. | 0.773 |
OSY40572.1 | opuCC | BG845_02647 | BG845_02646 | MOSC domain protein. | Glycine betaine/carnitine/choline-binding protein OpuCC precursor. | 0.773 |
OSY42458.1 | opuCC | BG845_01378 | BG845_02646 | Hypothetical protein. | Glycine betaine/carnitine/choline-binding protein OpuCC precursor. | 0.830 |
OSY42458.1 | osmF_3 | BG845_01378 | BG845_02828 | Hypothetical protein. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.432 |
gmr | OSY40572.1 | BG845_02642 | BG845_02647 | Cyclic di-GMP phosphodiesterase Gmr. | MOSC domain protein. | 0.537 |
gmr | opuBB_1 | BG845_02642 | BG845_02644 | Cyclic di-GMP phosphodiesterase Gmr. | Choline transport system permease protein OpuBB. | 0.544 |
gmr | opuCA_2 | BG845_02642 | BG845_02643 | Cyclic di-GMP phosphodiesterase Gmr. | Carnitine transport ATP-binding protein OpuCA. | 0.540 |
gmr | opuCB | BG845_02642 | BG845_02645 | Cyclic di-GMP phosphodiesterase Gmr. | Carnitine transport permease protein OpuCB. | 0.544 |
gmr | opuCC | BG845_02642 | BG845_02646 | Cyclic di-GMP phosphodiesterase Gmr. | Glycine betaine/carnitine/choline-binding protein OpuCC precursor. | 0.550 |
opuBB_1 | OSY40572.1 | BG845_02644 | BG845_02647 | Choline transport system permease protein OpuBB. | MOSC domain protein. | 0.773 |
opuBB_1 | gmr | BG845_02644 | BG845_02642 | Choline transport system permease protein OpuBB. | Cyclic di-GMP phosphodiesterase Gmr. | 0.544 |
opuBB_1 | opuCA_2 | BG845_02644 | BG845_02643 | Choline transport system permease protein OpuBB. | Carnitine transport ATP-binding protein OpuCA. | 0.998 |
opuBB_1 | opuCA_3 | BG845_02644 | BG845_02830 | Choline transport system permease protein OpuBB. | Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA. | 0.991 |
opuBB_1 | opuCB | BG845_02644 | BG845_02645 | Choline transport system permease protein OpuBB. | Carnitine transport permease protein OpuCB. | 0.972 |
opuBB_1 | opuCC | BG845_02644 | BG845_02646 | Choline transport system permease protein OpuBB. | Glycine betaine/carnitine/choline-binding protein OpuCC precursor. | 0.998 |
opuBB_1 | osmF_3 | BG845_02644 | BG845_02828 | Choline transport system permease protein OpuBB. | Putative osmoprotectant uptake system substrate-binding protein OsmF precursor. | 0.997 |
opuBB_2 | opuCA_2 | BG845_02831 | BG845_02643 | Choline transport system permease protein OpuBB. | Carnitine transport ATP-binding protein OpuCA. | 0.987 |
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